(15 nodes) Preribosome, small subunit precursor network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005754	Piso0_005754 protein. (445 aa)
	Piso0_004889	Piso0_004889 protein. (1196 aa)
	Piso0_005754-2	Piso0_005754 protein. (445 aa)
	Piso0_004552	Piso0_004552 protein; Belongs to the protein kinase superfamily. (435 aa)
	Piso0_001241	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (519 aa)
	Piso0_003224	Piso0_003224 protein. (466 aa)
	Piso0_001330	Piso0_001330 protein. (771 aa)
	Piso0_001347	Piso0_001347 protein. (440 aa)
	Piso0_001241-2	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (519 aa)
	Piso0_001330-2	Piso0_001330 protein. (771 aa)
	Piso0_001347-2	Piso0_001347 protein. (436 aa)
	Piso0_001596-2	Piso0_001596 protein. (753 aa)
	Piso0_000734	Piso0_000734 protein. (452 aa)
	Piso0_000734-2	Piso0_000734 protein. (469 aa)
	Piso0_001051	Piso0_001051 protein. (255 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000734	Piso0_001051	G8YPX1	G8YS91	Piso0_000734 protein.	Piso0_001051 protein.	0.997
Piso0_000734	Piso0_001241	G8YPX1	G8YDU4	Piso0_000734 protein.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.997
Piso0_000734	Piso0_001241-2	G8YPX1	G8YMM5	Piso0_000734 protein.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.997
Piso0_000734	Piso0_001330	G8YPX1	G8YMG6	Piso0_000734 protein.	Piso0_001330 protein.	0.996
Piso0_000734	Piso0_001330-2	G8YPX1	G8YMV8	Piso0_000734 protein.	Piso0_001330 protein.	0.996
Piso0_000734	Piso0_001347	G8YPX1	G8YMI2	Piso0_000734 protein.	Piso0_001347 protein.	0.984
Piso0_000734	Piso0_001347-2	G8YPX1	G8YMX5	Piso0_000734 protein.	Piso0_001347 protein.	0.984
Piso0_000734	Piso0_001596-2	G8YPX1	G8YNK7	Piso0_000734 protein.	Piso0_001596 protein.	0.983
Piso0_000734	Piso0_003224	G8YPX1	G8YII0	Piso0_000734 protein.	Piso0_003224 protein.	0.936
Piso0_000734	Piso0_004552	G8YPX1	G8Y5S5	Piso0_000734 protein.	Piso0_004552 protein; Belongs to the protein kinase superfamily.	0.984
Piso0_000734	Piso0_004889	G8YPX1	G8Y0P9	Piso0_000734 protein.	Piso0_004889 protein.	0.983
Piso0_000734	Piso0_005754	G8YPX1	G8XZV2	Piso0_000734 protein.	Piso0_005754 protein.	0.996
Piso0_000734	Piso0_005754-2	G8YPX1	G8Y2U3	Piso0_000734 protein.	Piso0_005754 protein.	0.996
Piso0_000734-2	Piso0_001051	G8YRD3	G8YS91	Piso0_000734 protein.	Piso0_001051 protein.	0.997
Piso0_000734-2	Piso0_001241	G8YRD3	G8YDU4	Piso0_000734 protein.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.997
Piso0_000734-2	Piso0_001241-2	G8YRD3	G8YMM5	Piso0_000734 protein.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.997
Piso0_000734-2	Piso0_001330	G8YRD3	G8YMG6	Piso0_000734 protein.	Piso0_001330 protein.	0.996
Piso0_000734-2	Piso0_001330-2	G8YRD3	G8YMV8	Piso0_000734 protein.	Piso0_001330 protein.	0.996
Piso0_000734-2	Piso0_001347	G8YRD3	G8YMI2	Piso0_000734 protein.	Piso0_001347 protein.	0.984
Piso0_000734-2	Piso0_001347-2	G8YRD3	G8YMX5	Piso0_000734 protein.	Piso0_001347 protein.	0.984