STRINGSTRING
Piso0_004328 Piso0_004328 Piso0_002228 Piso0_002228 Piso0_002794 Piso0_002794 Piso0_002228-2 Piso0_002228-2 Piso0_002794-2 Piso0_002794-2 Piso0_001378 Piso0_001378 Piso0_001378-2 Piso0_001378-2 Piso0_000807 Piso0_000807 Piso0_000807-2 Piso0_000807-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Piso0_004328Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (470 aa)
Piso0_002228Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (960 aa)
Piso0_002794Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1041 aa)
Piso0_002228-2Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (960 aa)
Piso0_002794-2Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1039 aa)
Piso0_001378Piso0_001378 protein. (2206 aa)
Piso0_001378-2Piso0_001378 protein. (2206 aa)
Piso0_000807Piso0_000807 protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (342 aa)
Piso0_000807-2Piso0_000807 protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (340 aa)
Your Current Organism:
Millerozyma farinosa
NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064
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