(23 nodes) Fatty acid oxidation network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_004958	Piso0_004958 protein; Belongs to the carnitine/choline acetyltransferase family. (633 aa)
	Piso0_005028	Piso0_005028 protein. (330 aa)
	Piso0_005286	Piso0_005286 protein. (442 aa)
	Piso0_004958-2	Piso0_004958 protein; Belongs to the carnitine/choline acetyltransferase family. (633 aa)
	Piso0_005028-2	Piso0_005028 protein. (330 aa)
	Piso0_005286-2	Piso0_005286 protein. (442 aa)
	Piso0_004012	Piso0_004012 protein; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
	Piso0_004256	Piso0_004256 protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (341 aa)
	Piso0_002222	Piso0_002222 protein. (876 aa)
	Piso0_002765	Piso0_002765 protein. (274 aa)
	Piso0_002222-2	Piso0_002222 protein. (876 aa)
	Piso0_002765-2	Piso0_002765 protein. (274 aa)
	Piso0_003640	Piso0_003640 protein; Belongs to the thiolase-like superfamily. Thiolase family. (413 aa)
	Piso0_003447	Piso0_003447 protein. (807 aa)
	Piso0_003032	Piso0_003032 protein. (697 aa)
	Piso0_001461	Piso0_001461 protein. (900 aa)
	Piso0_001461-2	Piso0_001461 protein. (904 aa)
	Piso0_000792	Piso0_000792 protein. (224 aa)
	Piso0_000792-2	Piso0_000792 protein. (224 aa)
	Piso0_000053	Piso0_000053 protein. (275 aa)
	Piso0_000053-2	Piso0_000053 protein. (276 aa)
	Piso0_000350	Piso0_000350 protein. (187 aa)
	Piso0_000422	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (704 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000053	Piso0_000422	G8YSZ1	G8YVE3	Piso0_000053 protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.918
Piso0_000053	Piso0_000792	G8YSZ1	G8YQ28	Piso0_000053 protein.	Piso0_000792 protein.	0.429
Piso0_000053	Piso0_000792-2	G8YSZ1	G8YRI8	Piso0_000053 protein.	Piso0_000792 protein.	0.429
Piso0_000053	Piso0_001461	G8YSZ1	G8YKV0	Piso0_000053 protein.	Piso0_001461 protein.	0.849
Piso0_000053	Piso0_001461-2	G8YSZ1	G8YN83	Piso0_000053 protein.	Piso0_001461 protein.	0.849
Piso0_000053	Piso0_002765	G8YSZ1	G8YDG1	Piso0_000053 protein.	Piso0_002765 protein.	0.841
Piso0_000053	Piso0_002765-2	G8YSZ1	G8YFX0	Piso0_000053 protein.	Piso0_002765 protein.	0.842
Piso0_000053	Piso0_003447	G8YSZ1	G8YI45	Piso0_000053 protein.	Piso0_003447 protein.	0.494
Piso0_000053	Piso0_003640	G8YSZ1	G8YGG9	Piso0_000053 protein.	Piso0_003640 protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.987
Piso0_000053	Piso0_004012	G8YSZ1	G8YA54	Piso0_000053 protein.	Piso0_004012 protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.986
Piso0_000053	Piso0_004958	G8YSZ1	G8Y0W5	Piso0_000053 protein.	Piso0_004958 protein; Belongs to the carnitine/choline acetyltransferase family.	0.637
Piso0_000053	Piso0_004958-2	G8YSZ1	G8Y3V0	Piso0_000053 protein.	Piso0_004958 protein; Belongs to the carnitine/choline acetyltransferase family.	0.637
Piso0_000053	Piso0_005028	G8YSZ1	G8Y130	Piso0_000053 protein.	Piso0_005028 protein.	0.806
Piso0_000053	Piso0_005028-2	G8YSZ1	G8Y414	Piso0_000053 protein.	Piso0_005028 protein.	0.806
Piso0_000053	Piso0_005286	G8YSZ1	G8Y1S1	Piso0_000053 protein.	Piso0_005286 protein.	0.786
Piso0_000053	Piso0_005286-2	G8YSZ1	G8Y4P8	Piso0_000053 protein.	Piso0_005286 protein.	0.786
Piso0_000053-2	Piso0_000422	G8YUE4	G8YVE3	Piso0_000053 protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.918
Piso0_000053-2	Piso0_000792	G8YUE4	G8YQ28	Piso0_000053 protein.	Piso0_000792 protein.	0.429
Piso0_000053-2	Piso0_000792-2	G8YUE4	G8YRI8	Piso0_000053 protein.	Piso0_000792 protein.	0.429
Piso0_000053-2	Piso0_001461	G8YUE4	G8YKV0	Piso0_000053 protein.	Piso0_001461 protein.	0.849