(68 nodes) Golgi apparatus subcompartment network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005563	Piso0_005563 protein. (505 aa)
	Piso0_005675	Piso0_005675 protein. (953 aa)
	Piso0_005164	Piso0_005164 protein. (1804 aa)
	Piso0_005400	Piso0_005400 protein. (615 aa)
	Piso0_005407	Piso0_005407 protein. (400 aa)
	Piso0_005563-2	Piso0_005563 protein. (505 aa)
	Piso0_005675-2	Piso0_005675 protein. (953 aa)
	Piso0_005164-2	Piso0_005164 protein. (1804 aa)
	Piso0_005400-2	Piso0_005400 protein. (615 aa)
	Piso0_005407-2	Piso0_005407 protein. (400 aa)
	Piso0_004711	Piso0_004711 protein. (190 aa)
	Piso0_003756	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1175 aa)
	Piso0_003883	Piso0_003883 protein; Belongs to the protein kinase superfamily. (358 aa)
	Piso0_004032	Piso0_004032 protein. (361 aa)
	Piso0_004322	Piso0_004322 protein. (667 aa)
	Piso0_003774	Piso0_003774 protein. (322 aa)
	Piso0_004650	Piso0_004650 protein. (494 aa)
	Piso0_003912	Piso0_003912 protein. (1021 aa)
	Piso0_003997	GDT1 family protein. (331 aa)
	Piso0_004283	Piso0_004283 protein. (601 aa)
	Piso0_001979	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1294 aa)
	Piso0_001992	Protein YIP. (312 aa)
	Piso0_001994	Piso0_001994 protein. (339 aa)
	Piso0_002129	Piso0_002129 protein. (518 aa)
	Piso0_002527	Piso0_002527 protein; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	Piso0_002705	Piso0_002705 protein; Belongs to the peptidase S9B family. (932 aa)
	Piso0_002744	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (227 aa)
	Piso0_002773	Piso0_002773 protein. (713 aa)
	Piso0_002851	Piso0_002851 protein. (435 aa)
	Piso0_001256	Piso0_001256 protein. (324 aa)
	Piso0_002129-2	Piso0_002129 protein. (518 aa)
	Piso0_002527-2	Piso0_002527 protein; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	Piso0_002705-2	Piso0_002705 protein; Belongs to the peptidase S9B family. (930 aa)
	Piso0_002744-2	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (227 aa)
	Piso0_002773-2	Piso0_002773 protein. (711 aa)
	Piso0_002851-2	Piso0_002851 protein. (436 aa)
	Piso0_003190	Piso0_003190 protein. (575 aa)
	Piso0_003395	Piso0_003395 protein. (865 aa)
	Piso0_003300	Piso0_003300 protein. (200 aa)
	Piso0_003454	Piso0_003454 protein. (385 aa)
	Piso0_003522	Piso0_003522 protein. (375 aa)
	Piso0_001545	Piso0_001545 protein. (771 aa)
	Piso0_001979-2	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1294 aa)
	Piso0_001992-2	Protein YIP. (311 aa)
	Piso0_001994-2	Piso0_001994 protein. (339 aa)
	Piso0_001256-2	Piso0_001256 protein. (371 aa)
	Piso0_001545-2	Piso0_001545 protein. (771 aa)
	Piso0_000649	Piso0_000649 protein. (431 aa)
	Piso0_000869	Piso0_000869 protein; Belongs to the syntaxin family. (360 aa)
	Piso0_000872	Piso0_000872 protein. (342 aa)
	Piso0_000884	Piso0_000884 protein; Belongs to the adaptor complexes medium subunit family. (696 aa)
	Piso0_000995	Piso0_000995 protein. (1440 aa)
	Piso0_001021	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (657 aa)
	Piso0_000869-2	Piso0_000869 protein; Belongs to the syntaxin family. (365 aa)
	Piso0_000872-2	Piso0_000872 protein. (342 aa)
	Piso0_000884-2	Piso0_000884 protein; Belongs to the adaptor complexes medium subunit family. (696 aa)
	Piso0_001046	Piso0_001046 protein; Belongs to the syntaxin family. (230 aa)
	Piso0_000085	Protein YIP. (257 aa)
	Piso0_000088	Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily. (1126 aa)
	Piso0_000101	Piso0_000101 protein. (139 aa)
	Piso0_000138	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1666 aa)
	Piso0_000260	Piso0_000260 protein. (1687 aa)
	Piso0_000085-2	Protein YIP. (257 aa)
	Piso0_000088-2	Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily. (1129 aa)
	Piso0_000101-2	Piso0_000101 protein. (139 aa)
	Piso0_000138-2	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1666 aa)
	Piso0_000260-2	Piso0_000260 protein. (1689 aa)
	Piso0_000407	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (218 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000085	Piso0_001545	G8YT21	G8YL32	Protein YIP.	Piso0_001545 protein.	0.452
Piso0_000085	Piso0_001545-2	G8YT21	G8YNG2	Protein YIP.	Piso0_001545 protein.	0.452
Piso0_000085	Piso0_001992	G8YT21	G8YBE4	Protein YIP.	Protein YIP.	0.540
Piso0_000085	Piso0_001992-2	G8YT21	G8YM89	Protein YIP.	Protein YIP.	0.540
Piso0_000085-2	Piso0_001545	G8YUH3	G8YL32	Protein YIP.	Piso0_001545 protein.	0.452
Piso0_000085-2	Piso0_001545-2	G8YUH3	G8YNG2	Protein YIP.	Piso0_001545 protein.	0.452
Piso0_000085-2	Piso0_001992	G8YUH3	G8YBE4	Protein YIP.	Protein YIP.	0.540
Piso0_000085-2	Piso0_001992-2	G8YUH3	G8YM89	Protein YIP.	Protein YIP.	0.540
Piso0_000101	Piso0_005164	G8YT36	G8Y1F8	Piso0_000101 protein.	Piso0_005164 protein.	0.441
Piso0_000101	Piso0_005164-2	G8YT36	G8Y4E0	Piso0_000101 protein.	Piso0_005164 protein.	0.441
Piso0_000101-2	Piso0_005164	G8YUI8	G8Y1F8	Piso0_000101 protein.	Piso0_005164 protein.	0.441
Piso0_000101-2	Piso0_005164-2	G8YUI8	G8Y4E0	Piso0_000101 protein.	Piso0_005164 protein.	0.441
Piso0_000138	Piso0_001979	G8YT67	G8YBD1	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.408
Piso0_000138	Piso0_001979-2	G8YT67	G8YM76	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.408
Piso0_000138	Piso0_003395	G8YT67	G8YHZ5	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Piso0_003395 protein.	0.436
Piso0_000138	Piso0_003756	G8YT67	G8Y6I5	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.731
Piso0_000138-2	Piso0_001979	G8YUM1	G8YBD1	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.408
Piso0_000138-2	Piso0_001979-2	G8YUM1	G8YM76	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.408
Piso0_000138-2	Piso0_003395	G8YUM1	G8YHZ5	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Piso0_003395 protein.	0.436
Piso0_000138-2	Piso0_003756	G8YUM1	G8Y6I5	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.731