(10 nodes) Rudiment single hybrid motif network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_000240	Piso0_000240 protein. (1821 aa)
	Piso0_005064	Piso0_005064 protein. (795 aa)
	Piso0_005255-2	Piso0_005255 protein. (2304 aa)
	Piso0_001680	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. (560 aa)
	Piso0_001680-2	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. (560 aa)
	Piso0_005188	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1170 aa)
	Piso0_000240-2	Piso0_000240 protein. (1821 aa)
	Piso0_005188-2	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1170 aa)
	Piso0_005064-2	Piso0_005064 protein. (795 aa)
	Piso0_005255	Piso0_005255 protein. (2304 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000240	Piso0_000240-2	G8YTG1	G8YUW7	Piso0_000240 protein.	Piso0_000240 protein.	0.938
Piso0_000240	Piso0_005064	G8YTG1	G8Y165	Piso0_000240 protein.	Piso0_005064 protein.	0.526
Piso0_000240	Piso0_005064-2	G8YTG1	G8Y450	Piso0_000240 protein.	Piso0_005064 protein.	0.526
Piso0_000240	Piso0_005188	G8YTG1	G8Y1I2	Piso0_000240 protein.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.971
Piso0_000240	Piso0_005188-2	G8YTG1	G8Y4G2	Piso0_000240 protein.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.971
Piso0_000240	Piso0_005255	G8YTG1	G8Y1P2	Piso0_000240 protein.	Piso0_005255 protein.	0.981
Piso0_000240	Piso0_005255-2	G8YTG1	G8Y4L9	Piso0_000240 protein.	Piso0_005255 protein.	0.981
Piso0_000240-2	Piso0_000240	G8YUW7	G8YTG1	Piso0_000240 protein.	Piso0_000240 protein.	0.938
Piso0_000240-2	Piso0_005064	G8YUW7	G8Y165	Piso0_000240 protein.	Piso0_005064 protein.	0.526
Piso0_000240-2	Piso0_005064-2	G8YUW7	G8Y450	Piso0_000240 protein.	Piso0_005064 protein.	0.526
Piso0_000240-2	Piso0_005188	G8YUW7	G8Y1I2	Piso0_000240 protein.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.971
Piso0_000240-2	Piso0_005188-2	G8YUW7	G8Y4G2	Piso0_000240 protein.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.971
Piso0_000240-2	Piso0_005255	G8YUW7	G8Y1P2	Piso0_000240 protein.	Piso0_005255 protein.	0.981
Piso0_000240-2	Piso0_005255-2	G8YUW7	G8Y4L9	Piso0_000240 protein.	Piso0_005255 protein.	0.981
Piso0_001680	Piso0_005064	G8YLF6	G8Y165	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.	Piso0_005064 protein.	0.994
Piso0_001680	Piso0_005064-2	G8YLF6	G8Y450	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.	Piso0_005064 protein.	0.994
Piso0_001680	Piso0_005255	G8YLF6	G8Y1P2	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.	Piso0_005255 protein.	0.592
Piso0_001680	Piso0_005255-2	G8YLF6	G8Y4L9	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.	Piso0_005255 protein.	0.592
Piso0_001680-2	Piso0_005064	G8YNT5	G8Y165	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.	Piso0_005064 protein.	0.996
Piso0_001680-2	Piso0_005064-2	G8YNT5	G8Y450	Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.	Piso0_005064 protein.	0.996