93 items (Millerozyma farinosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_000581	Piso0_000581 protein. (480 aa)
	Piso0_000217-2	Piso0_000217 protein. (661 aa)
	Piso0_000011-2	Piso0_000011 protein. (595 aa)
	Piso0_000217	Piso0_000217 protein. (664 aa)
	Piso0_000011	Piso0_000011 protein. (595 aa)
	Piso0_000602	Piso0_000602 protein. (529 aa)
	Piso0_000575	Piso0_000575 protein. (519 aa)
	Piso0_001196	Piso0_001196 protein. (481 aa)
	Piso0_001190	Piso0_001190 protein. (567 aa)
	Piso0_001181	Piso0_001181 protein. (492 aa)
	Piso0_000667-2	Piso0_000667 protein. (609 aa)
	Piso0_000666-2	Piso0_000666 protein. (580 aa)
	Piso0_000662-2	Piso0_000662 protein. (630 aa)
	Piso0_000667	Piso0_000667 protein. (609 aa)
	Piso0_000666	Piso0_000666 protein. (582 aa)
	Piso0_000662	Piso0_000662 protein. (629 aa)
	Piso0_001879	Piso0_001879 protein. (500 aa)
	Piso0_002046	Piso0_002046 protein. (496 aa)
	Piso0_002052	Piso0_002052 protein. (498 aa)
	Piso0_002088	Piso0_002088 protein. (498 aa)
	Piso0_002093	Piso0_002093 protein. (486 aa)
	Piso0_002252	Piso0_002252 protein. (570 aa)
	Piso0_002327	Piso0_002327 protein. (661 aa)
	Piso0_002345	Piso0_002345 protein. (520 aa)
	Piso0_002464	Piso0_002464 protein. (623 aa)
	Piso0_001418	Piso0_001418 protein. (503 aa)
	Piso0_001303-2	Piso0_001303 protein. (682 aa)
	Piso0_001290-2	Piso0_001290 protein. (554 aa)
	Piso0_001289-2	Piso0_001289 protein. (639 aa)
	Piso0_001303	Piso0_001303 protein. (682 aa)
	Piso0_003085	Piso0_003085 protein. (605 aa)
	Piso0_003083	Piso0_003083 protein. (486 aa)
	Piso0_003021	Piso0_003021 protein. (499 aa)
	Piso0_002894	Piso0_002894 protein. (521 aa)
	Piso0_002891	Piso0_002891 protein. (578 aa)
	Piso0_003287	Piso0_003287 protein. (527 aa)
	Piso0_003125	Piso0_003125 protein. (583 aa)
	Piso0_003076	Piso0_003076 protein. (477 aa)
	Piso0_002905	Piso0_002905 protein. (591 aa)
	Piso0_002896	Piso0_002896 protein. (522 aa)
	Piso0_002888	Piso0_002888 protein. (529 aa)
	Piso0_003665	Piso0_003665 protein. (572 aa)
	Piso0_002879	Piso0_002879 protein. (524 aa)
	Piso0_002464-2	Piso0_002464 protein. (623 aa)
	Piso0_002345-2	Piso0_002345 protein. (520 aa)
	Piso0_002327-2	Piso0_002327 protein. (661 aa)
	Piso0_002252-2	Piso0_002252 protein. (571 aa)
	Piso0_002093-2	Piso0_002093 protein. (486 aa)
	Piso0_005437	Piso0_005437 protein. (501 aa)
	Piso0_002876	Piso0_002876 protein. (529 aa)
	Piso0_001289	Piso0_001289 protein. (622 aa)
	Piso0_001290	Piso0_001290 protein. (548 aa)
	Piso0_004823-2	Piso0_004823 protein. (529 aa)
	Piso0_002088-2	Piso0_002088 protein. (497 aa)
	Piso0_005002-2	Piso0_005002 protein. (480 aa)
	Piso0_005180-2	Piso0_005180 protein. (567 aa)
	Piso0_005437-2	Piso0_005437 protein. (501 aa)
	Piso0_004691	Piso0_004691 protein. (507 aa)
	Piso0_004721	Piso0_004721 protein. (486 aa)
	Piso0_003679	Piso0_003679 protein. (544 aa)
	Piso0_003684	Piso0_003684 protein. (500 aa)
	Piso0_003689	Piso0_003689 protein. (507 aa)
	Piso0_004098	Piso0_004098 protein. (479 aa)
	Piso0_005587	Piso0_005587 protein. (523 aa)
	Piso0_005841	Piso0_005841 protein. (535 aa)
	Piso0_005878	Piso0_005878 protein. (505 aa)
	Piso0_005905	Piso0_005905 protein. (618 aa)
	Piso0_005907	Piso0_005907 protein. (527 aa)
	Piso0_004752	Piso0_004752 protein. (545 aa)
	Piso0_004754	Piso0_004754 protein. (452 aa)
	Piso0_004763	Piso0_004763 protein. (562 aa)
	Piso0_004823	Piso0_004823 protein. (529 aa)
	Piso0_004934	Piso0_004934 protein. (514 aa)
	Piso0_005002	Piso0_005002 protein. (480 aa)
	Piso0_005180	Piso0_005180 protein. (567 aa)
	Piso0_005566	Piso0_005566 protein. (529 aa)
	Piso0_005587-2	Piso0_005587 protein. (520 aa)
	Piso0_005841-2	Piso0_005841 protein. (536 aa)
	Piso0_005878-2	Piso0_005878 protein. (505 aa)
	Piso0_005907-2	Piso0_005907 protein. (527 aa)
	Piso0_005915	Piso0_005915 protein. (529 aa)
	Piso0_005924	Piso0_005924 protein. (529 aa)
	Piso0_004754-2	Piso0_004754 protein. (452 aa)
	Piso0_004763-2	Piso0_004763 protein. (562 aa)
	Piso0_004189	Piso0_004189 protein. (498 aa)
	Piso0_004348	Piso0_004348 protein. (582 aa)
	Piso0_004578	Piso0_004578 protein. (528 aa)
	Piso0_004717	Piso0_004717 protein. (528 aa)
	Piso0_004735	Piso0_004735 protein. (521 aa)
	Piso0_003826	Piso0_003826 protein. (503 aa)
	Piso0_003858	Piso0_003858 protein. (532 aa)
	Piso0_003877	Piso0_003877 protein. (544 aa)
	Piso0_003685	Piso0_003685 protein. (481 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000666	Piso0_002905	G8YPQ5	G8YGM7	Piso0_000666 protein.	Piso0_002905 protein.	0.536
Piso0_000666	Piso0_003125	G8YPQ5	G8YH91	Piso0_000666 protein.	Piso0_003125 protein.	0.551
Piso0_000666	Piso0_003877	G8YPQ5	G8Y9R9	Piso0_000666 protein.	Piso0_003877 protein.	0.526
Piso0_000666-2	Piso0_002905	G8YR66	G8YGM7	Piso0_000666 protein.	Piso0_002905 protein.	0.536
Piso0_000666-2	Piso0_003125	G8YR66	G8YH91	Piso0_000666 protein.	Piso0_003125 protein.	0.551
Piso0_000666-2	Piso0_003877	G8YR66	G8Y9R9	Piso0_000666 protein.	Piso0_003877 protein.	0.526
Piso0_000667	Piso0_002905	G8YPQ6	G8YGM7	Piso0_000667 protein.	Piso0_002905 protein.	0.536
Piso0_000667	Piso0_003125	G8YPQ6	G8YH91	Piso0_000667 protein.	Piso0_003125 protein.	0.551
Piso0_000667	Piso0_003877	G8YPQ6	G8Y9R9	Piso0_000667 protein.	Piso0_003877 protein.	0.526
Piso0_000667-2	Piso0_002905	G8YR67	G8YGM7	Piso0_000667 protein.	Piso0_002905 protein.	0.536
Piso0_000667-2	Piso0_003125	G8YR67	G8YH91	Piso0_000667 protein.	Piso0_003125 protein.	0.551
Piso0_000667-2	Piso0_003877	G8YR67	G8Y9R9	Piso0_000667 protein.	Piso0_003877 protein.	0.526
Piso0_002905	Piso0_000666	G8YGM7	G8YPQ5	Piso0_002905 protein.	Piso0_000666 protein.	0.536
Piso0_002905	Piso0_000666-2	G8YGM7	G8YR66	Piso0_002905 protein.	Piso0_000666 protein.	0.536
Piso0_002905	Piso0_000667	G8YGM7	G8YPQ6	Piso0_002905 protein.	Piso0_000667 protein.	0.536
Piso0_002905	Piso0_000667-2	G8YGM7	G8YR67	Piso0_002905 protein.	Piso0_000667 protein.	0.536
Piso0_002905	Piso0_003877	G8YGM7	G8Y9R9	Piso0_002905 protein.	Piso0_003877 protein.	0.560
Piso0_003125	Piso0_000666	G8YH91	G8YPQ5	Piso0_003125 protein.	Piso0_000666 protein.	0.551
Piso0_003125	Piso0_000666-2	G8YH91	G8YR66	Piso0_003125 protein.	Piso0_000666 protein.	0.551
Piso0_003125	Piso0_000667	G8YH91	G8YPQ6	Piso0_003125 protein.	Piso0_000667 protein.	0.551