(57 nodes) Pyridoxal phosphate-dependent transferase network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005013	Piso0_005013 protein. (556 aa)
	Piso0_005111	Piso0_005111 protein. (375 aa)
	Piso0_005177	Piso0_005177 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (452 aa)
	Piso0_005237	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (573 aa)
	Piso0_005013-2	Piso0_005013 protein. (556 aa)
	Piso0_005111-2	Piso0_005111 protein. (375 aa)
	Piso0_005177-2	Piso0_005177 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (451 aa)
	Piso0_005237-2	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (573 aa)
	Piso0_004406	Piso0_004406 protein. (522 aa)
	Piso0_004096	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (564 aa)
	Piso0_004328	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (470 aa)
	Piso0_004431	Aspartate aminotransferase. (420 aa)
	Piso0_004514	Piso0_004514 protein. (429 aa)
	Piso0_004627	Piso0_004627 protein. (398 aa)
	Piso0_004654	Piso0_004654 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (470 aa)
	Piso0_003921	Piso0_003921 protein. (591 aa)
	Piso0_004043	Piso0_004043 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (509 aa)
	Piso0_002091	Aspartate aminotransferase. (402 aa)
	Piso0_002492	Piso0_002492 protein. (527 aa)
	Piso0_002601	Piso0_002601 protein. (401 aa)
	Piso0_002614	Ornithine aminotransferase. (436 aa)
	Piso0_002618	Piso0_002618 protein. (439 aa)
	Piso0_002685	Piso0_002685 protein. (370 aa)
	Piso0_002794	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1041 aa)
	Piso0_002874	Piso0_002874 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (433 aa)
	Piso0_001245	Piso0_001245 protein. (594 aa)
	Piso0_002091-2	Aspartate aminotransferase. (402 aa)
	Piso0_002492-2	Piso0_002492 protein. (528 aa)
	Piso0_002601-2	Piso0_002601 protein. (401 aa)
	Piso0_002614-2	Ornithine aminotransferase. (436 aa)
	Piso0_002618-2	Piso0_002618 protein. (439 aa)
	Piso0_002685-2	Piso0_002685 protein. (367 aa)
	Piso0_002794-2	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1039 aa)
	Piso0_002874-2	Piso0_002874 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (436 aa)
	Piso0_003506	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (492 aa)
	Piso0_003043	Piso0_003043 protein. (489 aa)
	Piso0_003080	Piso0_003080 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (429 aa)
	Piso0_001446	Piso0_001446 protein. (504 aa)
	Piso0_001476	Piso0_001476 protein. (435 aa)
	Piso0_001577	Piso0_001577 protein. (479 aa)
	Piso0_001693	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family. (456 aa)
	Piso0_001245-2	Piso0_001245 protein. (594 aa)
	Piso0_001446-2	Piso0_001446 protein. (504 aa)
	Piso0_001476-2	Piso0_001476 protein. (435 aa)
	Piso0_001577-2	Piso0_001577 protein. (478 aa)
	Piso0_001693-2	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family. (456 aa)
	Piso0_000661	Piso0_000661 protein. (373 aa)
	Piso0_000746	Piso0_000746 protein. (456 aa)
	Piso0_000829	Piso0_000829 protein. (404 aa)
	Piso0_001133	Phosphoserine aminotransferase. (393 aa)
	Piso0_000661-2	Piso0_000661 protein. (373 aa)
	Piso0_000746-2	Piso0_000746 protein. (456 aa)
	Piso0_000829-2	Piso0_000829 protein. (404 aa)
	Piso0_000034	Piso0_000034 protein. (417 aa)
	Piso0_000057	Piso0_000057 protein. (581 aa)
	Piso0_000034-2	Piso0_000034 protein. (417 aa)
	Piso0_000057-2	Piso0_000057 protein. (581 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000034	Piso0_000057	G8YSX3	G8YSZ5	Piso0_000034 protein.	Piso0_000057 protein.	0.882
Piso0_000034	Piso0_000057-2	G8YSX3	G8YUE8	Piso0_000034 protein.	Piso0_000057 protein.	0.882
Piso0_000034	Piso0_000661	G8YSX3	G8YPQ0	Piso0_000034 protein.	Piso0_000661 protein.	0.898
Piso0_000034	Piso0_000661-2	G8YSX3	G8YR61	Piso0_000034 protein.	Piso0_000661 protein.	0.898
Piso0_000034	Piso0_000746	G8YSX3	G8YPY2	Piso0_000034 protein.	Piso0_000746 protein.	0.590
Piso0_000034	Piso0_000746-2	G8YSX3	G8YRE4	Piso0_000034 protein.	Piso0_000746 protein.	0.590
Piso0_000034	Piso0_001133	G8YSX3	G8YR09	Piso0_000034 protein.	Phosphoserine aminotransferase.	0.825
Piso0_000034	Piso0_002685	G8YSX3	G8YD91	Piso0_000034 protein.	Piso0_002685 protein.	0.898
Piso0_000034	Piso0_002685-2	G8YSX3	G8YFP7	Piso0_000034 protein.	Piso0_002685 protein.	0.898
Piso0_000034	Piso0_002794	G8YSX3	G8YDI9	Piso0_000034 protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.905
Piso0_000034	Piso0_002794-2	G8YSX3	G8YFZ8	Piso0_000034 protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.905
Piso0_000034	Piso0_003043	G8YSX3	G8YK70	Piso0_000034 protein.	Piso0_003043 protein.	0.961
Piso0_000034	Piso0_003506	G8YSX3	G8YIA3	Piso0_000034 protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.956
Piso0_000034	Piso0_004043	G8YSX3	G8YA84	Piso0_000034 protein.	Piso0_004043 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.847
Piso0_000034	Piso0_004328	G8YSX3	G8Y8H8	Piso0_000034 protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.957
Piso0_000034	Piso0_004406	G8YSX3	G8Y5D7	Piso0_000034 protein.	Piso0_004406 protein.	0.590
Piso0_000034	Piso0_004514	G8YSX3	G8Y903	Piso0_000034 protein.	Piso0_004514 protein.	0.522
Piso0_000034	Piso0_004654	G8YSX3	G8Y9D8	Piso0_000034 protein.	Piso0_004654 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.847
Piso0_000034	Piso0_005013	G8YSX3	G8Y115	Piso0_000034 protein.	Piso0_005013 protein.	0.882
Piso0_000034	Piso0_005013-2	G8YSX3	G8Y3Z9	Piso0_000034 protein.	Piso0_005013 protein.	0.882