(16 nodes) GroEL-like apical domain superfamily network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_000871-2	Piso0_000871 protein. (2444 aa)
	Piso0_000509	Piso0_000509 protein. (554 aa)
	Piso0_000131-2	T-complex protein 1 subunit gamma. (526 aa)
	Piso0_000400	T-complex protein 1 subunit delta. (533 aa)
	Piso0_000131	T-complex protein 1 subunit gamma. (526 aa)
	Piso0_000871	Piso0_000871 protein. (2439 aa)
	Piso0_001699-2	Piso0_001699 protein. (554 aa)
	Piso0_001652-2	Piso0_001652 protein. (559 aa)
	Piso0_001360-2	Piso0_001360 protein. (527 aa)
	Piso0_001360	Piso0_001360 protein. (563 aa)
	Piso0_001699	Piso0_001699 protein. (554 aa)
	Piso0_001652	Piso0_001652 protein. (554 aa)
	Piso0_003586	Piso0_003586 protein. (552 aa)
	Piso0_004347	Piso0_004347 protein; Belongs to the chaperonin (HSP60) family. (571 aa)
	Piso0_005490-2	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (544 aa)
	Piso0_005490	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (544 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000131	Piso0_000400	G8YT61	G8YTW6	T-complex protein 1 subunit gamma.	T-complex protein 1 subunit delta.	0.999
Piso0_000131	Piso0_000509	G8YT61	G8YVM3	T-complex protein 1 subunit gamma.	Piso0_000509 protein.	0.999
Piso0_000131	Piso0_001360	G8YT61	G8YMJ5	T-complex protein 1 subunit gamma.	Piso0_001360 protein.	0.995
Piso0_000131	Piso0_001360-2	G8YT61	G8YMY8	T-complex protein 1 subunit gamma.	Piso0_001360 protein.	0.995
Piso0_000131	Piso0_001652	G8YT61	G8YLC9	T-complex protein 1 subunit gamma.	Piso0_001652 protein.	0.990
Piso0_000131	Piso0_001652-2	G8YT61	G8YNQ8	T-complex protein 1 subunit gamma.	Piso0_001652 protein.	0.990
Piso0_000131	Piso0_001699	G8YT61	G8YLH5	T-complex protein 1 subunit gamma.	Piso0_001699 protein.	0.995
Piso0_000131	Piso0_001699-2	G8YT61	G8YNV4	T-complex protein 1 subunit gamma.	Piso0_001699 protein.	0.995
Piso0_000131	Piso0_003586	G8YT61	G8YJH4	T-complex protein 1 subunit gamma.	Piso0_003586 protein.	0.999
Piso0_000131	Piso0_004347	G8YT61	G8Y8J6	T-complex protein 1 subunit gamma.	Piso0_004347 protein; Belongs to the chaperonin (HSP60) family.	0.623
Piso0_000131	Piso0_005490	G8YT61	G8XZ56	T-complex protein 1 subunit gamma.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.995
Piso0_000131	Piso0_005490-2	G8YT61	G8Y243	T-complex protein 1 subunit gamma.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.995
Piso0_000131-2	Piso0_000400	G8YUL6	G8YTW6	T-complex protein 1 subunit gamma.	T-complex protein 1 subunit delta.	0.999
Piso0_000131-2	Piso0_000509	G8YUL6	G8YVM3	T-complex protein 1 subunit gamma.	Piso0_000509 protein.	0.999
Piso0_000131-2	Piso0_001360	G8YUL6	G8YMJ5	T-complex protein 1 subunit gamma.	Piso0_001360 protein.	0.995
Piso0_000131-2	Piso0_001360-2	G8YUL6	G8YMY8	T-complex protein 1 subunit gamma.	Piso0_001360 protein.	0.995
Piso0_000131-2	Piso0_001652	G8YUL6	G8YLC9	T-complex protein 1 subunit gamma.	Piso0_001652 protein.	0.990
Piso0_000131-2	Piso0_001652-2	G8YUL6	G8YNQ8	T-complex protein 1 subunit gamma.	Piso0_001652 protein.	0.990
Piso0_000131-2	Piso0_001699	G8YUL6	G8YLH5	T-complex protein 1 subunit gamma.	Piso0_001699 protein.	0.995
Piso0_000131-2	Piso0_001699-2	G8YUL6	G8YNV4	T-complex protein 1 subunit gamma.	Piso0_001699 protein.	0.995