35 items (Millerozyma farinosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005047-2	Piso0_005047 protein. (1028 aa)
	Piso0_005443-2	Piso0_005443 protein. (480 aa)
	Piso0_004504	Piso0_004504 protein. (619 aa)
	Piso0_004575	Piso0_004575 protein; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity. (300 aa)
	Piso0_002536	Piso0_002536 protein. (676 aa)
	Piso0_002536-2	Piso0_002536 protein. (687 aa)
	Piso0_003612	Piso0_003612 protein. (232 aa)
	Piso0_003215	Piso0_003215 protein. (467 aa)
	Piso0_003305	Piso0_003305 protein. (593 aa)
	Piso0_003352	Piso0_003352 protein. (987 aa)
	Piso0_003517	Piso0_003517 protein. (419 aa)
	Piso0_003038	Piso0_003038 protein. (422 aa)
	Piso0_001432	Piso0_001432 protein. (630 aa)
	Piso0_001612	Piso0_001612 protein. (482 aa)
	Piso0_001717	Piso0_001717 protein. (585 aa)
	Piso0_001773	Piso0_001773 protein. (1506 aa)
	Piso0_001870	Piso0_001870 protein. (727 aa)
	Piso0_001309	Piso0_001309 protein. (1299 aa)
	Piso0_001309-2	Piso0_001309 protein. (1296 aa)
	Piso0_001432-2	Piso0_001432 protein. (605 aa)
	Piso0_001612-2	Piso0_001612 protein. (487 aa)
	Piso0_001717-2	Piso0_001717 protein. (585 aa)
	Piso0_001773-2	Piso0_001773 protein. (1500 aa)
	Piso0_001870-2	Piso0_001870 protein. (727 aa)
	Piso0_000672	Piso0_000672 protein. (299 aa)
	Piso0_000672-2	Piso0_000672 protein. (299 aa)
	Piso0_000132	Piso0_000132 protein. (1091 aa)
	Piso0_000348	Piso0_000348 protein. (1197 aa)
	Piso0_000132-2	Piso0_000132 protein. (1091 aa)
	Piso0_005443	Piso0_005443 protein. (480 aa)
	Piso0_004840	Piso0_004840 protein. (415 aa)
	Piso0_005047	Piso0_005047 protein. (1027 aa)
	Piso0_005174	Piso0_005174 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1272 aa)
	Piso0_004840-2	Piso0_004840 protein. (415 aa)
	Piso0_005174-2	Piso0_005174 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1261 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000132	Piso0_001870	G8YT62	G8YLY8	Piso0_000132 protein.	Piso0_001870 protein.	0.912
Piso0_000132	Piso0_001870-2	G8YT62	G8YPB3	Piso0_000132 protein.	Piso0_001870 protein.	0.912
Piso0_000132-2	Piso0_001870	G8YUL7	G8YLY8	Piso0_000132 protein.	Piso0_001870 protein.	0.912
Piso0_000132-2	Piso0_001870-2	G8YUL7	G8YPB3	Piso0_000132 protein.	Piso0_001870 protein.	0.912
Piso0_000348	Piso0_000672	G8YTR4	G8YPR1	Piso0_000348 protein.	Piso0_000672 protein.	0.582
Piso0_000348	Piso0_000672-2	G8YTR4	G8YR72	Piso0_000348 protein.	Piso0_000672 protein.	0.582
Piso0_000348	Piso0_001309	G8YTR4	G8YME6	Piso0_000348 protein.	Piso0_001309 protein.	0.482
Piso0_000348	Piso0_001309-2	G8YTR4	G8YMT9	Piso0_000348 protein.	Piso0_001309 protein.	0.482
Piso0_000348	Piso0_001432	G8YTR4	G8YKS2	Piso0_000348 protein.	Piso0_001432 protein.	0.823
Piso0_000348	Piso0_001432-2	G8YTR4	G8YN55	Piso0_000348 protein.	Piso0_001432 protein.	0.823
Piso0_000348	Piso0_001612	G8YTR4	G8YL92	Piso0_000348 protein.	Piso0_001612 protein.	0.797
Piso0_000348	Piso0_001612-2	G8YTR4	G8YNM2	Piso0_000348 protein.	Piso0_001612 protein.	0.797
Piso0_000348	Piso0_001773	G8YTR4	G8YLP4	Piso0_000348 protein.	Piso0_001773 protein.	0.482
Piso0_000348	Piso0_001773-2	G8YTR4	G8YP21	Piso0_000348 protein.	Piso0_001773 protein.	0.482
Piso0_000348	Piso0_001870	G8YTR4	G8YLY8	Piso0_000348 protein.	Piso0_001870 protein.	0.431
Piso0_000348	Piso0_001870-2	G8YTR4	G8YPB3	Piso0_000348 protein.	Piso0_001870 protein.	0.431
Piso0_000348	Piso0_002536	G8YTR4	G8YCV9	Piso0_000348 protein.	Piso0_002536 protein.	0.823
Piso0_000348	Piso0_002536-2	G8YTR4	G8YFB0	Piso0_000348 protein.	Piso0_002536 protein.	0.823
Piso0_000348	Piso0_003038	G8YTR4	G8YK65	Piso0_000348 protein.	Piso0_003038 protein.	0.712
Piso0_000348	Piso0_004840	G8YTR4	G8Y0K3	Piso0_000348 protein.	Piso0_004840 protein.	0.928