(29 nodes) Phenylalanine metabolism network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005741	Piso0_005741 protein. (917 aa)
	Piso0_005528	Piso0_005528 protein. (177 aa)
	Piso0_000605	Piso0_000605 protein. (554 aa)
	Piso0_000605-2	Piso0_000605 protein. (554 aa)
	Piso0_000465	Piso0_000465 protein. (568 aa)
	Piso0_000597	Piso0_000597 protein. (472 aa)
	Piso0_001147	Piso0_001147 protein. (525 aa)
	Piso0_001476-2	Piso0_001476 protein. (435 aa)
	Piso0_001003	Amine oxidase. (698 aa)
	Piso0_002900	Piso0_002900 protein. (808 aa)
	Piso0_005007	Piso0_005007 protein. (344 aa)
	Piso0_005528-2	Piso0_005528 protein. (177 aa)
	Piso0_005741-2	Piso0_005741 protein. (917 aa)
	Piso0_005007-2	Piso0_005007 protein. (344 aa)
	Piso0_001476	Piso0_001476 protein. (435 aa)
	Piso0_002912	Amine oxidase. (664 aa)
	Piso0_002601-2	Piso0_002601 protein. (401 aa)
	Piso0_002492-2	Piso0_002492 protein. (528 aa)
	Piso0_002343-2	Piso0_002343 protein. (701 aa)
	Piso0_002126-2	Piso0_002126 protein. (567 aa)
	Piso0_002091-2	Aspartate aminotransferase. (402 aa)
	Piso0_002601	Piso0_002601 protein. (401 aa)
	Piso0_002492	Piso0_002492 protein. (527 aa)
	Piso0_002126	Piso0_002126 protein. (600 aa)
	Piso0_002091	Aspartate aminotransferase. (402 aa)
	Piso0_004725	Piso0_004725 protein. (549 aa)
	Piso0_004723	Piso0_004723 protein. (532 aa)
	Piso0_004514	Piso0_004514 protein. (429 aa)
	Piso0_004431	Aspartate aminotransferase. (420 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000465	Piso0_000605	G8YU24	G8YPJ6	Piso0_000465 protein.	Piso0_000605 protein.	0.903
Piso0_000465	Piso0_000605-2	G8YU24	G8YR13	Piso0_000465 protein.	Piso0_000605 protein.	0.903
Piso0_000465	Piso0_002126	G8YU24	G8YBS0	Piso0_000465 protein.	Piso0_002126 protein.	0.909
Piso0_000465	Piso0_002126-2	G8YU24	G8YE70	Piso0_000465 protein.	Piso0_002126 protein.	0.909
Piso0_000465	Piso0_004723	G8YU24	G8Y9K6	Piso0_000465 protein.	Piso0_004723 protein.	0.422
Piso0_000465	Piso0_004725	G8YU24	G8Y9K8	Piso0_000465 protein.	Piso0_004725 protein.	0.897
Piso0_000597	Piso0_001003	G8YST8	G8YS44	Piso0_000597 protein.	Amine oxidase.	0.643
Piso0_000597	Piso0_002601	G8YST8	G8YD19	Piso0_000597 protein.	Piso0_002601 protein.	0.418
Piso0_000597	Piso0_002601-2	G8YST8	G8YFH2	Piso0_000597 protein.	Piso0_002601 protein.	0.418
Piso0_000597	Piso0_002912	G8YST8	G8YJU1	Piso0_000597 protein.	Amine oxidase.	0.643
Piso0_000597	Piso0_004514	G8YST8	G8Y903	Piso0_000597 protein.	Piso0_004514 protein.	0.705
Piso0_000605	Piso0_000465	G8YPJ6	G8YU24	Piso0_000605 protein.	Piso0_000465 protein.	0.903
Piso0_000605	Piso0_002126	G8YPJ6	G8YBS0	Piso0_000605 protein.	Piso0_002126 protein.	0.866
Piso0_000605	Piso0_002126-2	G8YPJ6	G8YE70	Piso0_000605 protein.	Piso0_002126 protein.	0.866
Piso0_000605	Piso0_004723	G8YPJ6	G8Y9K6	Piso0_000605 protein.	Piso0_004723 protein.	0.422
Piso0_000605	Piso0_004725	G8YPJ6	G8Y9K8	Piso0_000605 protein.	Piso0_004725 protein.	0.483
Piso0_000605-2	Piso0_000465	G8YR13	G8YU24	Piso0_000605 protein.	Piso0_000465 protein.	0.903
Piso0_000605-2	Piso0_002126	G8YR13	G8YBS0	Piso0_000605 protein.	Piso0_002126 protein.	0.866
Piso0_000605-2	Piso0_002126-2	G8YR13	G8YE70	Piso0_000605 protein.	Piso0_002126 protein.	0.866
Piso0_000605-2	Piso0_004723	G8YR13	G8Y9K6	Piso0_000605 protein.	Piso0_004723 protein.	0.422