(72 nodes) Glycerolipid metabolism network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005607	Piso0_005607 protein. (307 aa)
	Piso0_000172	Piso0_000172 protein. (631 aa)
	Piso0_001005	Piso0_001005 protein. (771 aa)
	Piso0_000172-2	Piso0_000172 protein. (631 aa)
	Piso0_000370	Patatin-like phospholipase domain-containing protein; Lipid hydrolase; Belongs to the PLPL family. (711 aa)
	Piso0_000425	Piso0_000425 protein. (306 aa)
	Piso0_001099	Piso0_001099 protein. (246 aa)
	Piso0_000582	Piso0_000582 protein. (599 aa)
	Piso0_000953-2	Piso0_000953 protein. (297 aa)
	Piso0_001089	Piso0_001089 protein; Belongs to the aldehyde dehydrogenase family. (522 aa)
	Piso0_000953	Piso0_000953 protein. (297 aa)
	Piso0_001188	Piso0_001188 protein; Belongs to the aldehyde dehydrogenase family. (536 aa)
	Piso0_001508-2	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (551 aa)
	Piso0_001474-2	Piso0_001474 protein. (565 aa)
	Piso0_001462-2	Piso0_001462 protein. (817 aa)
	Piso0_001284-2	Piso0_001284 protein. (357 aa)
	Piso0_001231-2	Piso0_001231 protein. (360 aa)
	Piso0_001211	Piso0_001211 protein. (620 aa)
	Piso0_001988-2	Piso0_001988 protein. (294 aa)
	Piso0_001937-2	Piso0_001937 protein. (845 aa)
	Piso0_001508	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (551 aa)
	Piso0_001474	Piso0_001474 protein. (567 aa)
	Piso0_001462	Piso0_001462 protein. (817 aa)
	Piso0_003464	Piso0_003464 protein. (539 aa)
	Piso0_003435	Piso0_003435 protein. (294 aa)
	Piso0_003054	Piso0_003054 protein; Belongs to the FGGY kinase family. (630 aa)
	Piso0_003580	Piso0_003580 protein; Belongs to the membrane-bound acyltransferase family. (598 aa)
	Piso0_002811-2	Piso0_002811 protein. (301 aa)
	Piso0_002808-2	Piso0_002808 protein. (506 aa)
	Piso0_002686-2	Piso0_002686 protein; Belongs to the aldehyde dehydrogenase family. (501 aa)
	Piso0_002561-2	Piso0_002561 protein. (280 aa)
	Piso0_002477-2	Piso0_002477 protein. (503 aa)
	Piso0_002326-2	Piso0_002326 protein. (400 aa)
	Piso0_002315-2	Piso0_002315 protein. (312 aa)
	Piso0_002223-2	Piso0_002223 protein. (591 aa)
	Piso0_002097-2	Piso0_002097 protein. (307 aa)
	Piso0_001284	Piso0_001284 protein. (357 aa)
	Piso0_001231	Piso0_001231 protein. (360 aa)
	Piso0_002811	Piso0_002811 protein. (301 aa)
	Piso0_002808	Piso0_002808 protein. (506 aa)
	Piso0_002686	Piso0_002686 protein; Belongs to the aldehyde dehydrogenase family. (501 aa)
	Piso0_002561	Piso0_002561 protein. (280 aa)
	Piso0_002477	Piso0_002477 protein. (499 aa)
	Piso0_002326	Piso0_002326 protein. (400 aa)
	Piso0_002315	Piso0_002315 protein. (313 aa)
	Piso0_002223	Piso0_002223 protein. (591 aa)
	Piso0_002097	Piso0_002097 protein. (306 aa)
	Piso0_001988	Piso0_001988 protein. (294 aa)
	Piso0_001937	Piso0_001937 protein. (840 aa)
	Piso0_004265	Piso0_004265 protein. (229 aa)
	Piso0_003717	Piso0_003717 protein. (191 aa)
	Piso0_003696	Piso0_003696 protein. (596 aa)
	Piso0_003959	Piso0_003959 protein. (219 aa)
	Piso0_004391	Piso0_004391 protein. (336 aa)
	Piso0_004376	Piso0_004376 protein. (252 aa)
	Piso0_004366	Piso0_004366 protein. (905 aa)
	Piso0_003897	Piso0_003897 protein. (677 aa)
	Piso0_003734	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (303 aa)
	Piso0_004772-2	Piso0_004772 protein. (596 aa)
	Piso0_005788-2	Piso0_005788 protein. (299 aa)
	Piso0_005747-2	tRNA (guanine(26)-N(2))-dimethyltransferase. (552 aa)
	Piso0_005714-2	Piso0_005714 protein. (264 aa)
	Piso0_005642-2	Piso0_005642 protein. (361 aa)
	Piso0_005622-2	Piso0_005622 protein. (259 aa)
	Piso0_005607-2	Piso0_005607 protein. (271 aa)
	Piso0_005368	Piso0_005368 protein. (838 aa)
	Piso0_004772	Piso0_004772 protein. (618 aa)
	Piso0_005788	Piso0_005788 protein. (299 aa)
	Piso0_005747	tRNA (guanine(26)-N(2))-dimethyltransferase. (552 aa)
	Piso0_005714	Piso0_005714 protein. (264 aa)
	Piso0_005642	Piso0_005642 protein. (361 aa)
	Piso0_005622	Piso0_005622 protein. (259 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000172	Piso0_000370	G8YTA0	G8YV93	Piso0_000172 protein.	Patatin-like phospholipase domain-containing protein; Lipid hydrolase; Belongs to the PLPL family.	0.720
Piso0_000172	Piso0_001462	G8YTA0	G8YKV1	Piso0_000172 protein.	Piso0_001462 protein.	0.549
Piso0_000172	Piso0_001462-2	G8YTA0	G8YN84	Piso0_000172 protein.	Piso0_001462 protein.	0.549
Piso0_000172	Piso0_001937	G8YTA0	G8YB93	Piso0_000172 protein.	Piso0_001937 protein.	0.882
Piso0_000172	Piso0_001937-2	G8YTA0	G8YM36	Piso0_000172 protein.	Piso0_001937 protein.	0.882
Piso0_000172	Piso0_002315	G8YTA0	G8YCA2	Piso0_000172 protein.	Piso0_002315 protein.	0.880
Piso0_000172	Piso0_002315-2	G8YTA0	G8YEQ3	Piso0_000172 protein.	Piso0_002315 protein.	0.880
Piso0_000172	Piso0_002326	G8YTA0	G8YCB3	Piso0_000172 protein.	Piso0_002326 protein.	0.492
Piso0_000172	Piso0_002326-2	G8YTA0	G8YER4	Piso0_000172 protein.	Piso0_002326 protein.	0.492
Piso0_000172	Piso0_002477	G8YTA0	G8YCQ4	Piso0_000172 protein.	Piso0_002477 protein.	0.986
Piso0_000172	Piso0_002477-2	G8YTA0	G8YF56	Piso0_000172 protein.	Piso0_002477 protein.	0.986
Piso0_000172	Piso0_002811	G8YTA0	G8YDK6	Piso0_000172 protein.	Piso0_002811 protein.	0.652
Piso0_000172	Piso0_002811-2	G8YTA0	G8YG15	Piso0_000172 protein.	Piso0_002811 protein.	0.652
Piso0_000172	Piso0_003464	G8YTA0	G8YJ53	Piso0_000172 protein.	Piso0_003464 protein.	0.952
Piso0_000172	Piso0_003580	G8YTA0	G8YGB1	Piso0_000172 protein.	Piso0_003580 protein; Belongs to the membrane-bound acyltransferase family.	0.715
Piso0_000172	Piso0_003717	G8YTA0	G8YAU1	Piso0_000172 protein.	Piso0_003717 protein.	0.557
Piso0_000172	Piso0_003734	G8YTA0	G8Y6G3	Piso0_000172 protein.	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.635
Piso0_000172	Piso0_003897	G8YTA0	G8Y6X3	Piso0_000172 protein.	Piso0_003897 protein.	0.945
Piso0_000172	Piso0_004366	G8YTA0	G8Y8L5	Piso0_000172 protein.	Piso0_004366 protein.	0.942
Piso0_000172	Piso0_004391	G8YTA0	G8Y8N9	Piso0_000172 protein.	Piso0_004391 protein.	0.580