38 items (Millerozyma farinosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005444	Piso0_005444 protein. (423 aa)
	Piso0_005537	Piso0_005537 protein. (779 aa)
	Piso0_005547	Piso0_005547 protein. (300 aa)
	Piso0_004776	Piso0_004776 protein. (491 aa)
	Piso0_004885	Piso0_004885 protein. (758 aa)
	Piso0_004960	Piso0_004960 protein. (504 aa)
	Piso0_005013	Piso0_005013 protein. (556 aa)
	Piso0_005330	Piso0_005330 protein. (341 aa)
	Piso0_005547-2	Piso0_005547 protein. (300 aa)
	Piso0_001245-2	Piso0_001245 protein. (594 aa)
	Piso0_001708	Piso0_001708 protein. (433 aa)
	Piso0_001399-2	Piso0_001399 protein. (366 aa)
	Piso0_001616-2	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides. (372 aa)
	Piso0_001658-2	Piso0_001658 protein. (732 aa)
	Piso0_001658	Piso0_001658 protein. (732 aa)
	Piso0_001708-2	Piso0_001708 protein. (433 aa)
	Piso0_000619	Piso0_000619 protein. (303 aa)
	Piso0_000619-2	Piso0_000619 protein. (303 aa)
	Piso0_000057	Piso0_000057 protein. (581 aa)
	Piso0_000057-2	Piso0_000057 protein. (581 aa)
	Piso0_002976	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (313 aa)
	Piso0_001616	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides. (372 aa)
	Piso0_001399	Piso0_001399 protein. (366 aa)
	Piso0_003433	Protein-lysine N-methyltransferase EFM5; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that trimethylates elongation factor 1-alpha at 'Lys- 79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family. (246 aa)
	Piso0_002105	Piso0_002105 protein. (711 aa)
	Piso0_001245	Piso0_001245 protein. (594 aa)
	Piso0_002104-2	Piso0_002104 protein. (717 aa)
	Piso0_004776-2	Piso0_004776 protein. (492 aa)
	Piso0_004885-2	Piso0_004885 protein. (758 aa)
	Piso0_004960-2	Piso0_004960 protein. (504 aa)
	Piso0_005013-2	Piso0_005013 protein. (556 aa)
	Piso0_005330-2	Piso0_005330 protein. (341 aa)
	Piso0_005444-2	Piso0_005444 protein. (423 aa)
	Piso0_004398	Piso0_004398 protein. (326 aa)
	Piso0_004308	Piso0_004308 protein; Belongs to the sterol desaturase family. (335 aa)
	Piso0_002104	Piso0_002104 protein. (711 aa)
	Piso0_002105-2	Piso0_002105 protein. (715 aa)
	Piso0_002941	Piso0_002941 protein. (497 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000057	Piso0_000619	G8YSZ5	G8YPL0	Piso0_000057 protein.	Piso0_000619 protein.	0.439
Piso0_000057	Piso0_000619-2	G8YSZ5	G8YR20	Piso0_000057 protein.	Piso0_000619 protein.	0.439
Piso0_000057	Piso0_001616	G8YSZ5	G8YL96	Piso0_000057 protein.	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	0.463
Piso0_000057	Piso0_001616-2	G8YSZ5	G8YNM6	Piso0_000057 protein.	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	0.463
Piso0_000057	Piso0_001708	G8YSZ5	G8YLI3	Piso0_000057 protein.	Piso0_001708 protein.	0.507
Piso0_000057	Piso0_001708-2	G8YSZ5	G8YNW2	Piso0_000057 protein.	Piso0_001708 protein.	0.507
Piso0_000057	Piso0_002941	G8YSZ5	G8YGR2	Piso0_000057 protein.	Piso0_002941 protein.	0.562
Piso0_000057	Piso0_004308	G8YSZ5	G8Y8F8	Piso0_000057 protein.	Piso0_004308 protein; Belongs to the sterol desaturase family.	0.506
Piso0_000057	Piso0_004398	G8YSZ5	G8Y5C9	Piso0_000057 protein.	Piso0_004398 protein.	0.953
Piso0_000057	Piso0_004776	G8YSZ5	G8Y0E0	Piso0_000057 protein.	Piso0_004776 protein.	0.470
Piso0_000057	Piso0_004776-2	G8YSZ5	G8Y3C6	Piso0_000057 protein.	Piso0_004776 protein.	0.470
Piso0_000057	Piso0_004960	G8YSZ5	G8Y0W6	Piso0_000057 protein.	Piso0_004960 protein.	0.530
Piso0_000057	Piso0_004960-2	G8YSZ5	G8Y3V2	Piso0_000057 protein.	Piso0_004960 protein.	0.530
Piso0_000057	Piso0_005013	G8YSZ5	G8Y115	Piso0_000057 protein.	Piso0_005013 protein.	0.993
Piso0_000057	Piso0_005013-2	G8YSZ5	G8Y3Z9	Piso0_000057 protein.	Piso0_005013 protein.	0.993
Piso0_000057-2	Piso0_000619	G8YUE8	G8YPL0	Piso0_000057 protein.	Piso0_000619 protein.	0.439
Piso0_000057-2	Piso0_000619-2	G8YUE8	G8YR20	Piso0_000057 protein.	Piso0_000619 protein.	0.439
Piso0_000057-2	Piso0_001616	G8YUE8	G8YL96	Piso0_000057 protein.	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	0.463
Piso0_000057-2	Piso0_001616-2	G8YUE8	G8YNM6	Piso0_000057 protein.	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	0.463
Piso0_000057-2	Piso0_001708	G8YUE8	G8YLI3	Piso0_000057 protein.	Piso0_001708 protein.	0.507