(40 nodes) Propanoate metabolism network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005895	Piso0_005895 protein. (650 aa)
	Piso0_005255	Piso0_005255 protein. (2304 aa)
	Piso0_005895-2	Piso0_005895 protein. (656 aa)
	Piso0_005255-2	Piso0_005255 protein. (2304 aa)
	Piso0_003782	Acetyl-coenzyme A synthetase. (679 aa)
	Piso0_004354	Acetyl-coenzyme A synthetase. (671 aa)
	Piso0_004654	Piso0_004654 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (470 aa)
	Piso0_004720	Piso0_004720 protein. (595 aa)
	Piso0_004012	Piso0_004012 protein; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
	Piso0_004043	Piso0_004043 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (509 aa)
	Piso0_001983	Piso0_001983 protein. (554 aa)
	Piso0_002187	Piso0_002187 protein. (603 aa)
	Piso0_002511	Piso0_002511 protein. (543 aa)
	Piso0_002724	Piso0_002724 protein. (313 aa)
	Piso0_002865	Dihydrolipoyl dehydrogenase. (495 aa)
	Piso0_001294	Piso0_001294 protein. (335 aa)
	Piso0_002187-2	Piso0_002187 protein. (603 aa)
	Piso0_002511-2	Piso0_002511 protein. (543 aa)
	Piso0_002724-2	Piso0_002724 protein. (313 aa)
	Piso0_002865-2	Dihydrolipoyl dehydrogenase. (495 aa)
	Piso0_003633	Piso0_003633 protein. (369 aa)
	Piso0_001461	Piso0_001461 protein. (900 aa)
	Piso0_001551	Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (324 aa)
	Piso0_001621	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (506 aa)
	Piso0_001662	Piso0_001662 protein. (452 aa)
	Piso0_001983-2	Piso0_001983 protein. (554 aa)
	Piso0_001294-2	Piso0_001294 protein. (335 aa)
	Piso0_001461-2	Piso0_001461 protein. (904 aa)
	Piso0_001551-2	Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (324 aa)
	Piso0_001621-2	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (506 aa)
	Piso0_001662-2	Piso0_001662 protein. (452 aa)
	Piso0_001197	Piso0_001197 protein. (313 aa)
	Piso0_000808	Piso0_000808 protein. (337 aa)
	Piso0_000808-2	Piso0_000808 protein. (337 aa)
	Piso0_000015	Piso0_000015 protein. (340 aa)
	Piso0_000095	Piso0_000095 protein. (1932 aa)
	Piso0_000015-2	Piso0_000015 protein. (340 aa)
	Piso0_000095-2	Piso0_000095 protein. (1932 aa)
	Piso0_000422	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (704 aa)
	Piso0_000591	Piso0_000591 protein. (513 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000015	Piso0_000422	G8YSV5	G8YVE3	Piso0_000015 protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.538
Piso0_000015	Piso0_001621	G8YSV5	G8YLA1	Piso0_000015 protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.559
Piso0_000015	Piso0_001621-2	G8YSV5	G8YNN1	Piso0_000015 protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.559
Piso0_000015-2	Piso0_000422	G8YUB3	G8YVE3	Piso0_000015 protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.538
Piso0_000015-2	Piso0_001621	G8YUB3	G8YLA1	Piso0_000015 protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.559
Piso0_000015-2	Piso0_001621-2	G8YUB3	G8YNN1	Piso0_000015 protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.559
Piso0_000422	Piso0_000015	G8YVE3	G8YSV5	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_000015 protein.	0.538
Piso0_000422	Piso0_000015-2	G8YVE3	G8YUB3	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_000015 protein.	0.538
Piso0_000422	Piso0_000808	G8YVE3	G8YQ44	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_000808 protein.	0.538
Piso0_000422	Piso0_000808-2	G8YVE3	G8YRK4	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_000808 protein.	0.538
Piso0_000422	Piso0_001197	G8YVE3	G8YPI5	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_001197 protein.	0.744
Piso0_000422	Piso0_001294	G8YVE3	G8YDZ5	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_001294 protein.	0.538
Piso0_000422	Piso0_001294-2	G8YVE3	G8YMS4	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_001294 protein.	0.538
Piso0_000422	Piso0_001461	G8YVE3	G8YKV0	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_001461 protein.	0.977
Piso0_000422	Piso0_001461-2	G8YVE3	G8YN83	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_001461 protein.	0.977
Piso0_000422	Piso0_001551	G8YVE3	G8YL38	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.739
Piso0_000422	Piso0_001551-2	G8YVE3	G8YNG8	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.739
Piso0_000422	Piso0_001621	G8YVE3	G8YLA1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.919
Piso0_000422	Piso0_001621-2	G8YVE3	G8YNN1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.919
Piso0_000422	Piso0_002511	G8YVE3	G8YCT5	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Piso0_002511 protein.	0.942