43 items (Millerozyma farinosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_001557	Piso0_001557 protein. (1039 aa)
	Piso0_003032	Piso0_003032 protein. (697 aa)
	Piso0_002929	Piso0_002929 protein. (254 aa)
	Piso0_003604	Piso0_003604 protein. (1525 aa)
	Piso0_003489	Piso0_003489 protein. (1450 aa)
	Piso0_003447	Piso0_003447 protein. (807 aa)
	Piso0_003125	Piso0_003125 protein. (583 aa)
	Piso0_002905	Piso0_002905 protein. (591 aa)
	Piso0_002537-2	Piso0_002537 protein. (354 aa)
	Piso0_002291-2	Piso0_002291 protein; Belongs to the ABC transporter superfamily. (1493 aa)
	Piso0_002262-2	Piso0_002262 protein. (1237 aa)
	Piso0_001289	Piso0_001289 protein. (622 aa)
	Piso0_002537	Piso0_002537 protein. (351 aa)
	Piso0_002291	Piso0_002291 protein; Belongs to the ABC transporter superfamily. (1493 aa)
	Piso0_002262	Piso0_002262 protein. (1236 aa)
	Piso0_003826	Piso0_003826 protein. (503 aa)
	Piso0_004578	Piso0_004578 protein. (528 aa)
	Piso0_004278	Piso0_004278 protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (370 aa)
	Piso0_003803	Piso0_003803 protein. (1641 aa)
	Piso0_003681	Piso0_003681 protein; Belongs to the ABC transporter superfamily. (1498 aa)
	Piso0_005315-2	Piso0_005315 protein. (783 aa)
	Piso0_005119-2	Piso0_005119 protein. (691 aa)
	Piso0_005039-2	Piso0_005039 protein. (1300 aa)
	Piso0_005014-2	Piso0_005014 protein. (542 aa)
	Piso0_005899-2	Piso0_005899 protein. (1421 aa)
	Piso0_005315	Piso0_005315 protein. (783 aa)
	Piso0_005119	Piso0_005119 protein. (691 aa)
	Piso0_005039	Piso0_005039 protein. (1299 aa)
	Piso0_005014	Piso0_005014 protein. (545 aa)
	Piso0_005908	Piso0_005908 protein. (625 aa)
	Piso0_005899	Piso0_005899 protein. (1417 aa)
	Piso0_000857	Piso0_000857 protein. (752 aa)
	Piso0_001883	Piso0_001883 protein; Belongs to the ABC transporter superfamily. (1499 aa)
	Piso0_001557-2	Piso0_001557 protein. (1039 aa)
	Piso0_001311-2	Piso0_001311 protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (437 aa)
	Piso0_001289-2	Piso0_001289 protein. (639 aa)
	Piso0_001311	Piso0_001311 protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (437 aa)
	Piso0_000598	Piso0_000598 protein. (1353 aa)
	Piso0_000577	Piso0_000577 protein. (523 aa)
	Piso0_000378	Piso0_000378 protein. (709 aa)
	Piso0_000391	Piso0_000391 protein. (845 aa)
	Piso0_001127	Piso0_001127 protein. (609 aa)
	Piso0_000857-2	Piso0_000857 protein. (752 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000378	Piso0_000598	G8YVA1	G8YVV7	Piso0_000378 protein.	Piso0_000598 protein.	0.638
Piso0_000378	Piso0_000857	G8YVA1	G8YQ91	Piso0_000378 protein.	Piso0_000857 protein.	0.434
Piso0_000378	Piso0_000857-2	G8YVA1	G8YRQ2	Piso0_000378 protein.	Piso0_000857 protein.	0.434
Piso0_000378	Piso0_001127	G8YVA1	G8YSG7	Piso0_000378 protein.	Piso0_001127 protein.	0.541
Piso0_000378	Piso0_002262	G8YVA1	G8YC51	Piso0_000378 protein.	Piso0_002262 protein.	0.631
Piso0_000378	Piso0_002262-2	G8YVA1	G8YEK2	Piso0_000378 protein.	Piso0_002262 protein.	0.631
Piso0_000378	Piso0_002537	G8YVA1	G8YCW0	Piso0_000378 protein.	Piso0_002537 protein.	0.631
Piso0_000378	Piso0_002537-2	G8YVA1	G8YFB1	Piso0_000378 protein.	Piso0_002537 protein.	0.631
Piso0_000378	Piso0_003032	G8YVA1	G8YK59	Piso0_000378 protein.	Piso0_003032 protein.	0.453
Piso0_000378	Piso0_003447	G8YVA1	G8YI45	Piso0_000378 protein.	Piso0_003447 protein.	0.453
Piso0_000378	Piso0_003489	G8YVA1	G8YI86	Piso0_000378 protein.	Piso0_003489 protein.	0.638
Piso0_000378	Piso0_003604	G8YVA1	G8YJJ2	Piso0_000378 protein.	Piso0_003604 protein.	0.638
Piso0_000378	Piso0_003803	G8YVA1	G8Y6N2	Piso0_000378 protein.	Piso0_003803 protein.	0.638
Piso0_000378	Piso0_004278	G8YVA1	G8Y7Z4	Piso0_000378 protein.	Piso0_004278 protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.512
Piso0_000378	Piso0_005014	G8YVA1	G8Y116	Piso0_000378 protein.	Piso0_005014 protein.	0.426
Piso0_000378	Piso0_005014-2	G8YVA1	G8Y400	Piso0_000378 protein.	Piso0_005014 protein.	0.426
Piso0_000378	Piso0_005119	G8YVA1	G8Y1B6	Piso0_000378 protein.	Piso0_005119 protein.	0.725
Piso0_000378	Piso0_005119-2	G8YVA1	G8Y4A0	Piso0_000378 protein.	Piso0_005119 protein.	0.725
Piso0_000378	Piso0_005315	G8YVA1	G8Y1U9	Piso0_000378 protein.	Piso0_005315 protein.	0.725
Piso0_000378	Piso0_005315-2	G8YVA1	G8Y4S6	Piso0_000378 protein.	Piso0_005315 protein.	0.725