STRINGSTRING
Piso0_004872 Piso0_004872 Piso0_005887 Piso0_005887 Piso0_005859 Piso0_005859 Piso0_005829 Piso0_005829 Piso0_005822 Piso0_005822 Piso0_005798 Piso0_005798 Piso0_005753 Piso0_005753 Piso0_005737 Piso0_005737 Piso0_005721 Piso0_005721 Piso0_005689 Piso0_005689 Piso0_005679 Piso0_005679 Piso0_005664 Piso0_005664 Piso0_005615 Piso0_005615 Piso0_005526 Piso0_005526 Piso0_004226 Piso0_004226 Piso0_003987 Piso0_003987 Piso0_003857 Piso0_003857 Piso0_004595 Piso0_004595 Piso0_004562 Piso0_004562 Piso0_004494 Piso0_004494 Piso0_004375 Piso0_004375 Piso0_004242 Piso0_004242 Piso0_001892 Piso0_001892 Piso0_004148 Piso0_004148 Piso0_004104 Piso0_004104 Piso0_003837 Piso0_003837 Piso0_003765 Piso0_003765 Piso0_003722 Piso0_003722 Piso0_004552 Piso0_004552 Piso0_004457 Piso0_004457 Piso0_004451 Piso0_004451 Piso0_002002 Piso0_002002 Piso0_002184 Piso0_002184 Piso0_002196 Piso0_002196 Piso0_004416 Piso0_004416 Piso0_000971 Piso0_000971 Piso0_000958 Piso0_000958 Piso0_003664 Piso0_003664 Piso0_003621 Piso0_003621 Piso0_002868-2 Piso0_002868-2 Piso0_002802-2 Piso0_002802-2 Piso0_002783-2 Piso0_002783-2 Piso0_002720-2 Piso0_002720-2 Piso0_002591-2 Piso0_002591-2 Piso0_002555-2 Piso0_002555-2 Piso0_002530-2 Piso0_002530-2 Piso0_002365-2 Piso0_002365-2 Piso0_002305-2 Piso0_002305-2 Piso0_002295-2 Piso0_002295-2 Piso0_002251-2 Piso0_002251-2 Piso0_002196-2 Piso0_002196-2 Piso0_002184-2 Piso0_002184-2 Piso0_001257 Piso0_001257 Piso0_001241 Piso0_001241 Piso0_002868 Piso0_002868 Piso0_002802 Piso0_002802 Piso0_002783 Piso0_002783 Piso0_002720 Piso0_002720 Piso0_002591 Piso0_002591 Piso0_002555 Piso0_002555 Piso0_002530 Piso0_002530 Piso0_000941-2 Piso0_000941-2 Piso0_000924-2 Piso0_000924-2 Piso0_000902-2 Piso0_000902-2 Piso0_000836-2 Piso0_000836-2 Piso0_000803-2 Piso0_000803-2 Piso0_000727-2 Piso0_000727-2 Piso0_001082 Piso0_001082 Piso0_001073 Piso0_001073 Piso0_000941 Piso0_000941 Piso0_000924 Piso0_000924 Piso0_000902 Piso0_000902 Piso0_000836 Piso0_000836 Piso0_000803 Piso0_000803 Piso0_000727 Piso0_000727 Piso0_001841-2 Piso0_001841-2 Piso0_001595-2 Piso0_001595-2 Piso0_001483-2 Piso0_001483-2 Piso0_001410-2 Piso0_001410-2 Piso0_001380-2 Piso0_001380-2 Piso0_001369-2 Piso0_001369-2 Piso0_001347-2 Piso0_001347-2 Piso0_001338-2 Piso0_001338-2 Piso0_001329-2 Piso0_001329-2 Piso0_001257-2 Piso0_001257-2 Piso0_001241-2 Piso0_001241-2 Piso0_001347 Piso0_001347 Piso0_001338 Piso0_001338 Piso0_001329 Piso0_001329 Piso0_002002-2 Piso0_002002-2 Piso0_001892-2 Piso0_001892-2 Piso0_001841 Piso0_001841 Piso0_001595 Piso0_001595 Piso0_001483 Piso0_001483 Piso0_001410 Piso0_001410 Piso0_001380 Piso0_001380 Piso0_001369 Piso0_001369 Piso0_003583 Piso0_003583 Piso0_003552 Piso0_003552 Piso0_003224 Piso0_003224 Piso0_003288 Piso0_003288 Piso0_003248 Piso0_003248 Piso0_002932 Piso0_002932 Piso0_005345-2 Piso0_005345-2 Piso0_005261-2 Piso0_005261-2 Piso0_005090-2 Piso0_005090-2 Piso0_005087-2 Piso0_005087-2 Piso0_004931-2 Piso0_004931-2 Piso0_004872-2 Piso0_004872-2 Piso0_005887-2 Piso0_005887-2 Piso0_005859-2 Piso0_005859-2 Piso0_005829-2 Piso0_005829-2 Piso0_005822-2 Piso0_005822-2 Piso0_005798-2 Piso0_005798-2 Piso0_005753-2 Piso0_005753-2 Piso0_005737-2 Piso0_005737-2 Piso0_005721-2 Piso0_005721-2 Piso0_005689-2 Piso0_005689-2 Piso0_005679-2 Piso0_005679-2 Piso0_005664-2 Piso0_005664-2 Piso0_005615-2 Piso0_005615-2 Piso0_005526-2 Piso0_005526-2 Piso0_005345 Piso0_005345 Piso0_005261 Piso0_005261 Piso0_005090 Piso0_005090 Piso0_005087 Piso0_005087 Piso0_004931 Piso0_004931 Piso0_002251 Piso0_002251 Piso0_002295 Piso0_002295 Piso0_002305 Piso0_002305 Piso0_002365 Piso0_002365 Piso0_000524 Piso0_000524 Piso0_000321-2 Piso0_000321-2 Piso0_000256-2 Piso0_000256-2 Piso0_000156-2 Piso0_000156-2 Piso0_000023-2 Piso0_000023-2 Piso0_000437 Piso0_000437 Piso0_000321 Piso0_000321 Piso0_000256 Piso0_000256 Piso0_000156 Piso0_000156 Piso0_000023 Piso0_000023 Piso0_001143 Piso0_001143
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Piso0_004872Piso0_004872 protein. (287 aa)
Piso0_005887Piso0_005887 protein. (1840 aa)
Piso0_005859Piso0_005859 protein. (502 aa)
Piso0_005829Piso0_005829 protein. (1080 aa)
Piso0_005822Piso0_005822 protein. (183 aa)
Piso0_005798Piso0_005798 protein. (516 aa)
Piso0_005753Piso0_005753 protein; Belongs to the protein kinase superfamily. (331 aa)
Piso0_005737Piso0_005737 protein. (110 aa)
Piso0_005721Piso0_005721 protein. (224 aa)
Piso0_005689Piso0_005689 protein. (508 aa)
Piso0_005679Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4943 aa)
Piso0_005664Piso0_005664 protein. (164 aa)
Piso0_005615Piso0_005615 protein. (268 aa)
Piso0_005526Piso0_005526 protein. (415 aa)
Piso0_004226Piso0_004226 protein. (1366 aa)
Piso0_003987Piso0_003987 protein. (400 aa)
Piso0_003857Piso0_003857 protein. (499 aa)
Piso0_004595Piso0_004595 protein. (1176 aa)
Piso0_004562Piso0_004562 protein. (658 aa)
Piso0_004494U3 small nucleolar RNA-associated protein 22. (1197 aa)
Piso0_004375Piso0_004375 protein. (697 aa)
Piso0_004242Piso0_004242 protein. (309 aa)
Piso0_001892U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (635 aa)
Piso0_004148Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
Piso0_004104Piso0_004104 protein. (407 aa)
Piso0_003837Piso0_003837 protein. (943 aa)
Piso0_003765Piso0_003765 protein. (751 aa)
Piso0_003722Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (179 aa)
Piso0_004552Piso0_004552 protein; Belongs to the protein kinase superfamily. (435 aa)
Piso0_004457Piso0_004457 protein; Belongs to the protein kinase superfamily. (331 aa)
Piso0_004451Piso0_004451 protein. (398 aa)
Piso0_002002Piso0_002002 protein. (179 aa)
Piso0_002184Piso0_002184 protein. (436 aa)
Piso0_002196Piso0_002196 protein. (869 aa)
Piso0_004416Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. (245 aa)
Piso0_000971Piso0_000971 protein. (513 aa)
Piso0_000958Piso0_000958 protein. (519 aa)
Piso0_0036645'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (993 aa)
Piso0_003621Piso0_003621 protein. (795 aa)
Piso0_002868-2Piso0_002868 protein. (235 aa)
Piso0_002802-2H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (221 aa)
Piso0_002783-2Piso0_002783 protein. (972 aa)
Piso0_002720-260S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (506 aa)
Piso0_002591-2Piso0_002591 protein. (580 aa)
Piso0_002555-2Piso0_002555 protein. (859 aa)
Piso0_002530-2Piso0_002530 protein. (254 aa)
Piso0_002365-2Piso0_002365 protein. (592 aa)
Piso0_002305-2Piso0_002305 protein. (565 aa)
Piso0_002295-2Piso0_002295 protein. (556 aa)
Piso0_002251-2Piso0_002251 protein. (542 aa)
Piso0_002196-2Piso0_002196 protein. (869 aa)
Piso0_002184-2Piso0_002184 protein. (436 aa)
Piso0_001257Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (639 aa)
Piso0_00124120S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (519 aa)
Piso0_002868Piso0_002868 protein. (235 aa)
Piso0_002802H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (187 aa)
Piso0_002783Piso0_002783 protein. (972 aa)
Piso0_00272060S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (506 aa)
Piso0_002591Piso0_002591 protein. (581 aa)
Piso0_002555Piso0_002555 protein. (859 aa)
Piso0_002530Piso0_002530 protein. (254 aa)
Piso0_000941-2Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (200 aa)
Piso0_000924-2Piso0_000924 protein. (191 aa)
Piso0_000902-2Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (253 aa)
Piso0_000836-2Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (283 aa)
Piso0_000803-2Ribonuclease P protein subunit. (293 aa)
Piso0_000727-2Piso0_000727 protein. (402 aa)
Piso0_001082Piso0_001082 protein. (285 aa)
Piso0_001073Piso0_001073 protein. (655 aa)
Piso0_000941Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (199 aa)
Piso0_000924Piso0_000924 protein. (191 aa)
Piso0_000902Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (253 aa)
Piso0_000836Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (283 aa)
Piso0_000803Ribonuclease P protein subunit. (293 aa)
Piso0_000727Piso0_000727 protein. (402 aa)
Piso0_001841-2Piso0_001841 protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (371 aa)
Piso0_001595-2Piso0_001595 protein. (479 aa)
Piso0_001483-2Piso0_001483 protein. (765 aa)
Piso0_001410-2Piso0_001410 protein. (313 aa)
Piso0_001380-2Piso0_001380 protein. (284 aa)
Piso0_001369-2Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family. (71 aa)
Piso0_001347-2Piso0_001347 protein. (436 aa)
Piso0_001338-2Piso0_001338 protein. (797 aa)
Piso0_001329-2Piso0_001329 protein. (446 aa)
Piso0_001257-2Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (639 aa)
Piso0_001241-220S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (519 aa)
Piso0_001347Piso0_001347 protein. (440 aa)
Piso0_001338Piso0_001338 protein. (797 aa)
Piso0_001329Piso0_001329 protein. (444 aa)
Piso0_002002-2Piso0_002002 protein. (179 aa)
Piso0_001892-2U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (634 aa)
Piso0_001841Piso0_001841 protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (371 aa)
Piso0_001595Piso0_001595 protein. (479 aa)
Piso0_001483Piso0_001483 protein. (765 aa)
Piso0_001410Piso0_001410 protein. (313 aa)
Piso0_001380Piso0_001380 protein. (285 aa)
Piso0_001369Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family. (71 aa)
Piso0_003583Piso0_003583 protein. (373 aa)
Piso0_0035525'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1508 aa)
Piso0_003224Piso0_003224 protein. (466 aa)
Piso0_003288Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (154 aa)
Piso0_003248Piso0_003248 protein. (429 aa)
Piso0_002932Piso0_002932 protein. (395 aa)
Piso0_005345-2Piso0_005345 protein. (637 aa)
Piso0_005261-2Piso0_005261 protein. (880 aa)
Piso0_005090-2Piso0_005090 protein. (620 aa)
Piso0_005087-2Piso0_005087 protein. (1044 aa)
Piso0_004931-2RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1044 aa)
Piso0_004872-2Piso0_004872 protein. (287 aa)
Piso0_005887-2Piso0_005887 protein. (1840 aa)
Piso0_005859-2Piso0_005859 protein. (503 aa)
Piso0_005829-2Piso0_005829 protein. (1080 aa)
Piso0_005822-2Piso0_005822 protein. (183 aa)
Piso0_005798-2Piso0_005798 protein. (516 aa)
Piso0_005753-2Piso0_005753 protein; Belongs to the protein kinase superfamily. (331 aa)
Piso0_005737-2Piso0_005737 protein. (110 aa)
Piso0_005721-2Piso0_005721 protein. (224 aa)
Piso0_005689-2Piso0_005689 protein. (508 aa)
Piso0_005679-2Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4944 aa)
Piso0_005664-2Piso0_005664 protein. (162 aa)
Piso0_005615-2Piso0_005615 protein. (268 aa)
Piso0_005526-2Piso0_005526 protein. (415 aa)
Piso0_005345Piso0_005345 protein. (645 aa)
Piso0_005261Piso0_005261 protein. (880 aa)
Piso0_005090Piso0_005090 protein. (623 aa)
Piso0_005087Piso0_005087 protein. (1044 aa)
Piso0_004931RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1044 aa)
Piso0_002251Piso0_002251 protein. (542 aa)
Piso0_002295Piso0_002295 protein. (556 aa)
Piso0_002305Piso0_002305 protein. (565 aa)
Piso0_002365Piso0_002365 protein. (592 aa)
Piso0_000524Piso0_000524 protein. (256 aa)
Piso0_000321-2Piso0_000321 protein. (513 aa)
Piso0_000256-2Piso0_000256 protein; Belongs to the AAA ATPase family. (835 aa)
Piso0_000156-2Piso0_000156 protein. (156 aa)
Piso0_000023-2Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (524 aa)
Piso0_000437Piso0_000437 protein. (753 aa)
Piso0_000321Piso0_000321 protein. (513 aa)
Piso0_000256Piso0_000256 protein; Belongs to the AAA ATPase family. (835 aa)
Piso0_000156Piso0_000156 protein. (156 aa)
Piso0_000023Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (505 aa)
Piso0_001143GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (214 aa)
Your Current Organism:
Millerozyma farinosa
NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064
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