STRINGSTRING
Piso0_004952 Piso0_004952 Piso0_001783 Piso0_001783 Piso0_001912-2 Piso0_001912-2 Piso0_001463-2 Piso0_001463-2 Piso0_001598-2 Piso0_001598-2 Piso0_001783-2 Piso0_001783-2 Piso0_000878 Piso0_000878 Piso0_000977 Piso0_000977 Piso0_000878-2 Piso0_000878-2 Piso0_000093 Piso0_000093 Piso0_002405 Piso0_002405 Piso0_002407 Piso0_002407 Piso0_002676 Piso0_002676 Piso0_002778 Piso0_002778 Piso0_002056-2 Piso0_002056-2 Piso0_002061-2 Piso0_002061-2 Piso0_002142-2 Piso0_002142-2 Piso0_002260-2 Piso0_002260-2 Piso0_002405-2 Piso0_002405-2 Piso0_002407-2 Piso0_002407-2 Piso0_002676-2 Piso0_002676-2 Piso0_002778-2 Piso0_002778-2 Piso0_002903 Piso0_002903 Piso0_000093-2 Piso0_000093-2 Piso0_002260 Piso0_002260 Piso0_002142 Piso0_002142 Piso0_002061 Piso0_002061 Piso0_002056 Piso0_002056 Piso0_001912 Piso0_001912 Piso0_004221 Piso0_004221 Piso0_004310 Piso0_004310 Piso0_004163 Piso0_004163 Piso0_004151 Piso0_004151 Piso0_005299-2 Piso0_005299-2 Piso0_004952-2 Piso0_004952-2 Piso0_005299 Piso0_005299 Piso0_003164 Piso0_003164 Piso0_001463 Piso0_001463 Piso0_001598 Piso0_001598
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Piso0_004952Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
Piso0_001783DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2218 aa)
Piso0_001912-2Piso0_001912 protein. (317 aa)
Piso0_001463-2DNA ligase. (759 aa)
Piso0_001598-2Piso0_001598 protein. (467 aa)
Piso0_001783-2DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2219 aa)
Piso0_000878Piso0_000878 protein. (246 aa)
Piso0_000977Piso0_000977 protein. (156 aa)
Piso0_000878-2Piso0_000878 protein. (246 aa)
Piso0_000093Piso0_000093 protein. (493 aa)
Piso0_002405Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (343 aa)
Piso0_002407Piso0_002407 protein. (363 aa)
Piso0_002676DNA polymerase. (1079 aa)
Piso0_002778Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (362 aa)
Piso0_002056-2Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (380 aa)
Piso0_002061-2Piso0_002061 protein. (158 aa)
Piso0_002142-2Piso0_002142 protein. (344 aa)
Piso0_002260-2Piso0_002260 protein. (279 aa)
Piso0_002405-2Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (343 aa)
Piso0_002407-2Piso0_002407 protein. (395 aa)
Piso0_002676-2DNA polymerase. (1079 aa)
Piso0_002778-2Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (364 aa)
Piso0_002903Piso0_002903 protein. (658 aa)
Piso0_000093-2Piso0_000093 protein. (489 aa)
Piso0_002260Piso0_002260 protein. (278 aa)
Piso0_002142Piso0_002142 protein. (344 aa)
Piso0_002061Piso0_002061 protein. (158 aa)
Piso0_002056Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (380 aa)
Piso0_001912Piso0_001912 protein. (317 aa)
Piso0_004221Piso0_004221 protein. (356 aa)
Piso0_004310Piso0_004310 protein. (423 aa)
Piso0_004163Piso0_004163 protein. (414 aa)
Piso0_004151Piso0_004151 protein. (1155 aa)
Piso0_005299-2Piso0_005299 protein. (237 aa)
Piso0_004952-2Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
Piso0_005299Piso0_005299 protein. (237 aa)
Piso0_003164Piso0_003164 protein. (365 aa)
Piso0_001463DNA ligase. (759 aa)
Piso0_001598Piso0_001598 protein. (464 aa)
Your Current Organism:
Millerozyma farinosa
NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064
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