(12 nodes) COP9 signalosome, and Cul4-RING E3 ubiquitin ligase complex network (Trichophyton rubrum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TERG_12688	CULLIN_2 domain-containing protein; Belongs to the cullin family. (269 aa)
	TERG_12687	CULLIN_2 domain-containing protein; Belongs to the cullin family. (349 aa)
	TERG_02326	WD_REPEATS_REGION domain-containing protein. (439 aa)
	TERG_02470	PCI domain-containing protein. (395 aa)
	TERG_01935	PCI domain-containing protein. (503 aa)
	TERG_01974	CSN8_PSD8_EIF3K domain-containing protein. (228 aa)
	TERG_02729	CPSF_A domain-containing protein. (657 aa)
	TERG_04649	Uncharacterized protein. (372 aa)
	TERG_04013	MPN domain-containing protein. (391 aa)
	TERG_05275	COP9 signalosome complex subunit 5. (314 aa)
	TERG_05589	PCI domain-containing protein. (425 aa)
	TERG_07546	PCI domain-containing protein. (318 aa)

Your Current Organism:

Trichophyton rubrum

NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TERG_01935	TERG_01974	F2SIV2	F2SIZ0	PCI domain-containing protein.	CSN8_PSD8_EIF3K domain-containing protein.	0.999
TERG_01935	TERG_02326	F2SIV2	F2SGL3	PCI domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.779
TERG_01935	TERG_02470	F2SIV2	F2SHB8	PCI domain-containing protein.	PCI domain-containing protein.	0.999
TERG_01935	TERG_02729	F2SIV2	F2SKF8	PCI domain-containing protein.	CPSF_A domain-containing protein.	0.966
TERG_01935	TERG_04013	F2SIV2	F2SPL5	PCI domain-containing protein.	MPN domain-containing protein.	0.999
TERG_01935	TERG_04649	F2SIV2	F2SNY7	PCI domain-containing protein.	Uncharacterized protein.	0.999
TERG_01935	TERG_05275	F2SIV2	F2SRR2	PCI domain-containing protein.	COP9 signalosome complex subunit 5.	0.999
TERG_01935	TERG_05589	F2SIV2	F2SSY6	PCI domain-containing protein.	PCI domain-containing protein.	0.999
TERG_01935	TERG_07546	F2SIV2	F2SY87	PCI domain-containing protein.	PCI domain-containing protein.	0.999
TERG_01935	TERG_12687	F2SIV2	A0A080WRU4	PCI domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.870
TERG_01935	TERG_12688	F2SIV2	A0A080WJS7	PCI domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.870
TERG_01974	TERG_01935	F2SIZ0	F2SIV2	CSN8_PSD8_EIF3K domain-containing protein.	PCI domain-containing protein.	0.999
TERG_01974	TERG_02326	F2SIZ0	F2SGL3	CSN8_PSD8_EIF3K domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.678
TERG_01974	TERG_02470	F2SIZ0	F2SHB8	CSN8_PSD8_EIF3K domain-containing protein.	PCI domain-containing protein.	0.999
TERG_01974	TERG_02729	F2SIZ0	F2SKF8	CSN8_PSD8_EIF3K domain-containing protein.	CPSF_A domain-containing protein.	0.888
TERG_01974	TERG_04013	F2SIZ0	F2SPL5	CSN8_PSD8_EIF3K domain-containing protein.	MPN domain-containing protein.	0.994
TERG_01974	TERG_04649	F2SIZ0	F2SNY7	CSN8_PSD8_EIF3K domain-containing protein.	Uncharacterized protein.	0.999
TERG_01974	TERG_05275	F2SIZ0	F2SRR2	CSN8_PSD8_EIF3K domain-containing protein.	COP9 signalosome complex subunit 5.	0.999
TERG_01974	TERG_05589	F2SIZ0	F2SSY6	CSN8_PSD8_EIF3K domain-containing protein.	PCI domain-containing protein.	0.999
TERG_01974	TERG_07546	F2SIZ0	F2SY87	CSN8_PSD8_EIF3K domain-containing protein.	PCI domain-containing protein.	0.991