STRINGSTRING
TERG_11861 TERG_11861 TERG_12440 TERG_12440 TERG_12150 TERG_12150 TERG_12151 TERG_12151 TERG_12439 TERG_12439 TERG_00628 TERG_00628 TERG_00649 TERG_00649 TERG_00702 TERG_00702 TERG_08678 TERG_08678 TERG_00272 TERG_00272 TERG_00276 TERG_00276 TERG_01089 TERG_01089 TERG_00337 TERG_00337 TERG_00346 TERG_00346 TERG_01153 TERG_01153 TERG_02121 TERG_02121 TERG_02181 TERG_02181 TERG_02205 TERG_02205 TERG_02275 TERG_02275 TERG_02277 TERG_02277 TERG_01701 TERG_01701 TERG_02482 TERG_02482 TERG_02516 TERG_02516 TERG_02520 TERG_02520 TERG_01753 TERG_01753 TERG_02559 TERG_02559 TERG_01941 TERG_01941 TERG_02034 TERG_02034 TERG_02035 TERG_02035 TERG_02089 TERG_02089 TERG_02090 TERG_02090 TERG_03200 TERG_03200 TERG_03355 TERG_03355 TERG_03378 TERG_03378 TERG_03429 TERG_03429 TERG_03436 TERG_03436 TERG_03493 TERG_03493 TERG_03525 TERG_03525 TERG_02860 TERG_02860 TERG_02864 TERG_02864 TERG_02879 TERG_02879 TERG_03662 TERG_03662 TERG_03696 TERG_03696 TERG_03027 TERG_03027 TERG_03831 TERG_03831 TERG_03840 TERG_03840 TERG_03076 TERG_03076 TERG_03108 TERG_03108 TERG_04204 TERG_04204 TERG_04301 TERG_04301 TERG_04495 TERG_04495 TERG_04523 TERG_04523 TERG_04527 TERG_04527 TERG_04557 TERG_04557 TERG_04573 TERG_04573 TERG_04575 TERG_04575 TERG_03989 TERG_03989 TERG_04080 TERG_04080 TERG_04193 TERG_04193 TERG_04838 TERG_04838 TERG_04861 TERG_04861 TERG_05100 TERG_05100 TERG_05117 TERG_05117 TERG_05208 TERG_05208 TERG_05483 TERG_05483 TERG_05590 TERG_05590 TERG_05675 TERG_05675 TERG_05742 TERG_05742 TERG_05848 TERG_05848 TERG_06461 TERG_06461 TERG_06137 TERG_06137 TERG_06203 TERG_06203 TERG_06288 TERG_06288 TERG_06375 TERG_06375 TERG_06542 TERG_06542 TERG_06693 TERG_06693 TERG_06789 TERG_06789 TERG_07105 TERG_07105 TERG_07279 TERG_07279 TERG_07396 TERG_07396 TERG_07401 TERG_07401 TERG_07472 TERG_07472 TERG_07510 TERG_07510 TERG_08048 TERG_08048 TERG_08277 TERG_08277 TERG_08339 TERG_08339 TERG_08363 TERG_08363 TERG_08534 TERG_08534 TERG_08569 TERG_08569
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TERG_11861Helicase ATP-binding domain-containing protein. (372 aa)
TERG_12440RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (760 aa)
TERG_12150Serine/threonine-protein kinase bur1. (133 aa)
TERG_12151Serine/threonine-protein kinase bur1. (137 aa)
TERG_12439Uncharacterized protein. (112 aa)
TERG_00628Uncharacterized protein. (489 aa)
TERG_00649RTR1-type domain-containing protein. (338 aa)
TERG_00702Uncharacterized protein. (211 aa)
TERG_08678Uncharacterized protein. (361 aa)
TERG_00272CYCLIN domain-containing protein; Belongs to the cyclin family. (514 aa)
TERG_00276TATA-box-binding protein. (291 aa)
TERG_01089Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (289 aa)
TERG_00337TFIIB-type domain-containing protein. (352 aa)
TERG_00346Uncharacterized protein. (631 aa)
TERG_01153Uncharacterized protein. (195 aa)
TERG_02121RPOL4c domain-containing protein. (150 aa)
TERG_02181Protein kinase domain-containing protein. (189 aa)
TERG_02205BTP domain-containing protein. (213 aa)
TERG_02275Uncharacterized protein. (396 aa)
TERG_02277TFIIA_gamma_N domain-containing protein. (85 aa)
TERG_01701CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (342 aa)
TERG_02482TFIID_20kDa domain-containing protein. (654 aa)
TERG_02516Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1340 aa)
TERG_02520HELICc2 domain-containing protein. (290 aa)
TERG_01753RNA_pol_L_2 domain-containing protein. (160 aa)
TERG_02559Plus3 domain-containing protein. (637 aa)
TERG_01941Uncharacterized protein. (1241 aa)
TERG_02034S1 motif domain-containing protein. (191 aa)
TERG_02035Uncharacterized protein. (529 aa)
TERG_02089Transcription elongation factor S-II. (297 aa)
TERG_02090Uncharacterized protein. (182 aa)
TERG_03200Uncharacterized protein. (1225 aa)
TERG_03355Uncharacterized protein. (394 aa)
TERG_03378DUF3591 domain-containing protein. (1126 aa)
TERG_03429RPOL9 domain-containing protein. (123 aa)
TERG_03436HTH TFE/IIEalpha-type domain-containing protein. (472 aa)
TERG_03493Uncharacterized protein. (625 aa)
TERG_03525RPOLD domain-containing protein. (351 aa)
TERG_02860Uncharacterized protein. (258 aa)
TERG_02864Uncharacterized protein. (449 aa)
TERG_02879Uncharacterized protein. (190 aa)
TERG_03662Uncharacterized protein. (198 aa)
TERG_03696CID domain-containing protein. (242 aa)
TERG_03027Uncharacterized protein. (249 aa)
TERG_03831RNA polymerase II transcription factor B subunit 5. (137 aa)
TERG_03840Uncharacterized protein. (337 aa)
TERG_03076Uncharacterized protein. (268 aa)
TERG_03108Uncharacterized protein. (274 aa)
TERG_04204Uncharacterized protein. (296 aa)
TERG_04301Uncharacterized protein. (275 aa)
TERG_04495General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (489 aa)
TERG_04523CMGC/CDK/CRK7 protein kinase. (990 aa)
TERG_04527Uncharacterized protein. (615 aa)
TERG_04557Uncharacterized protein. (214 aa)
TERG_04573TAFII28 domain-containing protein. (408 aa)
TERG_04575TAF domain-containing protein. (447 aa)
TERG_03989CYCLIN domain-containing protein. (458 aa)
TERG_04080Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (120 aa)
TERG_04193Uncharacterized protein. (1201 aa)
TERG_04838CDC73_C domain-containing protein. (485 aa)
TERG_04861WD_REPEATS_REGION domain-containing protein. (497 aa)
TERG_05100Uncharacterized protein. (353 aa)
TERG_05117Uncharacterized protein. (413 aa)
TERG_05208Transcription factor iws1. (261 aa)
TERG_05483Uncharacterized protein. (889 aa)
TERG_05590Uncharacterized protein. (435 aa)
TERG_05675RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (386 aa)
TERG_05742DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1258 aa)
TERG_05848Uncharacterized protein. (243 aa)
TERG_06461FACT complex subunit spt16. (843 aa)
TERG_06137RRM domain-containing protein. (493 aa)
TERG_06203WD_REPEATS_REGION domain-containing protein. (554 aa)
TERG_06288FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (563 aa)
TERG_06375DUF4211 domain-containing protein. (388 aa)
TERG_06542Uncharacterized protein; Belongs to the cyclin family. (396 aa)
TERG_06693G_PROTEIN_RECEP_F1_2 domain-containing protein. (441 aa)
TERG_06789CDK-activating kinase assembly factor MAT1. (400 aa)
TERG_07105Uncharacterized protein. (430 aa)
TERG_07279Uncharacterized protein. (625 aa)
TERG_07396DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1559 aa)
TERG_07401Uncharacterized protein. (274 aa)
TERG_07472DNA repair helicase rad15. (790 aa)
TERG_07510Uncharacterized protein. (278 aa)
TERG_08048Uncharacterized protein. (277 aa)
TERG_08277Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (129 aa)
TERG_08339Uncharacterized protein. (177 aa)
TERG_08363Tyosinase_C domain-containing protein. (137 aa)
TERG_08534Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (487 aa)
TERG_08569Uncharacterized protein. (339 aa)
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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