STRINGSTRING
TERG_01089 TERG_01089 TERG_01701 TERG_01701 TERG_03436 TERG_03436 TERG_03831 TERG_03831 TERG_04495 TERG_04495 TERG_04527 TERG_04527 TERG_03989 TERG_03989 TERG_05117 TERG_05117 TERG_05675 TERG_05675 TERG_06789 TERG_06789 TERG_07279 TERG_07279 TERG_07472 TERG_07472
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TERG_01089Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (289 aa)
TERG_01701CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (342 aa)
TERG_03436HTH TFE/IIEalpha-type domain-containing protein. (472 aa)
TERG_03831RNA polymerase II transcription factor B subunit 5. (137 aa)
TERG_04495General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (489 aa)
TERG_04527Uncharacterized protein. (615 aa)
TERG_03989CYCLIN domain-containing protein. (458 aa)
TERG_05117Uncharacterized protein. (413 aa)
TERG_05675RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (386 aa)
TERG_06789CDK-activating kinase assembly factor MAT1. (400 aa)
TERG_07279Uncharacterized protein. (625 aa)
TERG_07472DNA repair helicase rad15. (790 aa)
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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