STRINGSTRING
TERG_01089 TERG_01089 TERG_01701 TERG_01701 TERG_03436 TERG_03436 TERG_03989 TERG_03989 TERG_06789 TERG_06789
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TERG_01089Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (289 aa)
TERG_01701CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (342 aa)
TERG_03436HTH TFE/IIEalpha-type domain-containing protein. (472 aa)
TERG_03989CYCLIN domain-containing protein. (458 aa)
TERG_06789CDK-activating kinase assembly factor MAT1. (400 aa)
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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