(37 nodes) tRNA aminoacylation for protein translation network (Trichophyton rubrum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TERG_11577	tRNA-synt_1e domain-containing protein. (229 aa)
	TERG_11576	Uncharacterized protein. (147 aa)
	TERG_00461	Phenylalanine-tRNA ligase, beta subunit. (600 aa)
	TERG_00771	Serine-tRNA ligase. (528 aa)
	TERG_00063	Lysine--tRNA ligase. (622 aa)
	TERG_01045	Threonine-tRNA ligase. (764 aa)
	TERG_01112	Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1066 aa)
	TERG_00363	Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (708 aa)
	TERG_02216	Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (707 aa)
	TERG_02227	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (426 aa)
	TERG_02314	tRNA-binding domain-containing protein. (433 aa)
	TERG_02324	Proline-tRNA ligase. (603 aa)
	TERG_01921	Valine-tRNA ligase. (908 aa)
	TERG_03656	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (711 aa)
	TERG_03050	Tyrosine--tRNA ligase. (452 aa)
	TERG_03077	Sfi1 domain-containing protein. (1066 aa)
	TERG_03080	Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1078 aa)
	TERG_04198	Glycine-tRNA ligase. (654 aa)
	TERG_04470	Serine-tRNA ligase. (473 aa)
	TERG_04702	Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (694 aa)
	TERG_04084	PEK/GCN2 protein kinase. (1471 aa)
	TERG_05279	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (445 aa)
	TERG_05313	PEK protein kinase. (804 aa)
	TERG_05781	Lysine-tRNA ligase. (567 aa)
	TERG_08876	Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1012 aa)
	TERG_06454	Tryptophan-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (407 aa)
	TERG_06612	Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (980 aa)
	TERG_06843	Phenylalanine-tRNA ligase, alpha subunit. (521 aa)
	TERG_06907	Tyrosine--tRNA ligase. (420 aa)
	TERG_07038	Glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (656 aa)
	TERG_07518	AA_TRNA_LIGASE_II domain-containing protein. (586 aa)
	TERG_07896	Proline-tRNA ligase. (631 aa)
	TERG_07966	Tryptophan-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (437 aa)
	TERG_08071	Threonine-tRNA ligase. (526 aa)
	TERG_08449	POLAc domain-containing protein. (1001 aa)
	TERG_08572	Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (599 aa)
	TERG_08589	Cysteine-tRNA ligase. (844 aa)

Your Current Organism:

Trichophyton rubrum

NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TERG_00063	TERG_00363	F2SDN0	F2SFE9	Lysine--tRNA ligase.	Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.850
TERG_00063	TERG_00461	F2SDN0	F2SBK0	Lysine--tRNA ligase.	Phenylalanine-tRNA ligase, beta subunit.	0.717
TERG_00063	TERG_00771	F2SDN0	F2SD71	Lysine--tRNA ligase.	Serine-tRNA ligase.	0.636
TERG_00063	TERG_01045	F2SDN0	F2SEP8	Lysine--tRNA ligase.	Threonine-tRNA ligase.	0.625
TERG_00063	TERG_01112	F2SDN0	F2SF18	Lysine--tRNA ligase.	Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.938
TERG_00063	TERG_01921	F2SDN0	F2SIT7	Lysine--tRNA ligase.	Valine-tRNA ligase.	0.739
TERG_00063	TERG_02216	F2SDN0	F2SG93	Lysine--tRNA ligase.	Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.850
TERG_00063	TERG_02227	F2SDN0	F2SGA4	Lysine--tRNA ligase.	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.829
TERG_00063	TERG_02314	F2SDN0	F2SGJ2	Lysine--tRNA ligase.	tRNA-binding domain-containing protein.	0.914
TERG_00063	TERG_02324	F2SDN0	F2SGL1	Lysine--tRNA ligase.	Proline-tRNA ligase.	0.932
TERG_00063	TERG_03050	F2SDN0	F2SME1	Lysine--tRNA ligase.	Tyrosine--tRNA ligase.	0.640
TERG_00063	TERG_03077	F2SDN0	F2SMG8	Lysine--tRNA ligase.	Sfi1 domain-containing protein.	0.636
TERG_00063	TERG_03080	F2SDN0	F2SMH0	Lysine--tRNA ligase.	Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.958
TERG_00063	TERG_03656	F2SDN0	F2SLC7	Lysine--tRNA ligase.	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.829
TERG_00063	TERG_04084	F2SDN0	F2SPT5	Lysine--tRNA ligase.	PEK/GCN2 protein kinase.	0.582
TERG_00063	TERG_04198	F2SDN0	F2SMP0	Lysine--tRNA ligase.	Glycine-tRNA ligase.	0.737
TERG_00063	TERG_04470	F2SDN0	F2SNG0	Lysine--tRNA ligase.	Serine-tRNA ligase.	0.728
TERG_00063	TERG_04702	F2SDN0	F2SP39	Lysine--tRNA ligase.	Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.845
TERG_00063	TERG_05279	F2SDN0	F2SRR6	Lysine--tRNA ligase.	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.861
TERG_00063	TERG_05313	F2SDN0	F2SRV1	Lysine--tRNA ligase.	PEK protein kinase.	0.518