(33 nodes) Protein deubiquitination network (Trichophyton rubrum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TERG_11674	Uncharacterized protein. (1043 aa)
	TERG_11870	Uncharacterized protein. (159 aa)
	TERG_11673	USP domain-containing protein; Belongs to the peptidase C19 family. (257 aa)
	TERG_07520	USP domain-containing protein; Belongs to the peptidase C19 family. (878 aa)
	TERG_06826	26S proteasome non-ATPase regulatory subunit 14. (333 aa)
	TERG_06741	Ubiquitin carboxyl-terminal hydrolase. (657 aa)
	TERG_06530	Ubiquitin carboxyl-terminal hydrolase. (911 aa)
	TERG_06964	Uncharacterized protein. (579 aa)
	TERG_06351	WD_REPEATS_REGION domain-containing protein. (437 aa)
	TERG_08894	MPN domain-containing protein. (455 aa)
	TERG_06489	Uncharacterized protein. (313 aa)
	TERG_06488	USP domain-containing protein; Belongs to the peptidase C19 family. (514 aa)
	TERG_05079	OTU domain-containing protein. (434 aa)
	TERG_04654	Ubiquitin carboxyl-terminal hydrolase. (783 aa)
	TERG_08820	Uncharacterized protein. (679 aa)
	TERG_08818	USP domain-containing protein; Belongs to the peptidase C19 family. (814 aa)
	TERG_04456	Uncharacterized protein. (337 aa)
	TERG_04417	MINDY_DUB domain-containing protein. (825 aa)
	TERG_03036	Uncharacterized protein; Belongs to the peptidase C19 family. (954 aa)
	TERG_03795	Uncharacterized protein; Belongs to the peptidase C19 family. (1568 aa)
	TERG_03179	NLPC_P60 domain-containing protein. (307 aa)
	TERG_02573	OTU domain-containing protein. (333 aa)
	TERG_01160	Uncharacterized protein. (129 aa)
	TERG_00137	SAGA-associated factor 11; Functions as component of the transcription regulatory histone acetylation (HAT) complex SAGA. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA [...] (345 aa)
	TERG_00110	Ubiquitin carboxyl-terminal hydrolase. (566 aa)
	TERG_00080	USP domain-containing protein. (511 aa)
	TERG_00822	OTU domain-containing protein. (318 aa)
	TERG_11999	Uncharacterized protein. (944 aa)
	TERG_11871	Ubiquitin carboxyl-terminal hydrolase. (244 aa)
	TERG_12000	USP domain-containing protein; Belongs to the peptidase C19 family. (1192 aa)
	TERG_08482	USP domain-containing protein; Belongs to the peptidase C19 family. (720 aa)
	TERG_08078	Ubiquitin carboxyl-terminal hydrolase. (323 aa)
	TERG_07716	Uncharacterized protein. (1022 aa)

Your Current Organism:

Trichophyton rubrum

NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TERG_00080	TERG_00110	F2SDP7	F2SDY0	USP domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.418
TERG_00080	TERG_03036	F2SDP7	F2SM78	USP domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.537
TERG_00080	TERG_03795	F2SDP7	F2SM23	USP domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.528
TERG_00080	TERG_04654	F2SDP7	F2SNZ2	USP domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.663
TERG_00080	TERG_11673	F2SDP7	A0A080WE93	USP domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.632
TERG_00080	TERG_11674	F2SDP7	A0A080WIL4	USP domain-containing protein.	Uncharacterized protein.	0.632
TERG_00110	TERG_00080	F2SDY0	F2SDP7	Ubiquitin carboxyl-terminal hydrolase.	USP domain-containing protein.	0.418
TERG_00110	TERG_00822	F2SDY0	F2SDG5	Ubiquitin carboxyl-terminal hydrolase.	OTU domain-containing protein.	0.471
TERG_00110	TERG_01160	F2SDY0	F2SFC0	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.519
TERG_00110	TERG_02573	F2SDY0	F2SHY1	Ubiquitin carboxyl-terminal hydrolase.	OTU domain-containing protein.	0.443
TERG_00110	TERG_03036	F2SDY0	F2SM78	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.560
TERG_00110	TERG_03179	F2SDY0	F2SJH2	Ubiquitin carboxyl-terminal hydrolase.	NLPC_P60 domain-containing protein.	0.986
TERG_00110	TERG_03795	F2SDY0	F2SM23	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.711
TERG_00110	TERG_04456	F2SDY0	F2SNE5	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.449
TERG_00110	TERG_04654	F2SDY0	F2SNZ2	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin carboxyl-terminal hydrolase.	0.565
TERG_00110	TERG_06530	F2SDY0	F2SVF9	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin carboxyl-terminal hydrolase.	0.490
TERG_00110	TERG_06826	F2SDY0	F2SWA7	Ubiquitin carboxyl-terminal hydrolase.	26S proteasome non-ATPase regulatory subunit 14.	0.994
TERG_00110	TERG_07520	F2SDY0	F2SY62	Ubiquitin carboxyl-terminal hydrolase.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.438
TERG_00110	TERG_08078	F2SDY0	F2SZT9	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin carboxyl-terminal hydrolase.	0.927
TERG_00110	TERG_08482	F2SDY0	F2T0Z3	Ubiquitin carboxyl-terminal hydrolase.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.500