(10 nodes) Septin, and Mitotic morphogenesis checkpoint signaling network (Zygosaccharomyces rouxii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5DPU9_ZYGRC	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (393 aa)
	C5DQ85_ZYGRC	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (396 aa)
	C5DQJ3_ZYGRC	ZYRO0B00770p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (533 aa)
	C5DRE4_ZYGRC	ZYRO0B07810p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (591 aa)
	C5DTP3_ZYGRC	ZYRO0C10186p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (521 aa)
	C5DZ13_ZYGRC	ZYRO0F17402p. (1189 aa)
	C5DZ88_ZYGRC	ZYRO0G02354p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (415 aa)
	C5DZD1_ZYGRC	ZYRO0G03366p. (1616 aa)
	C5DZJ9_ZYGRC	ZYRO0G05060p. (665 aa)
	C5E4A9_ZYGRC	ZYRO0E04378p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (326 aa)

Your Current Organism:

Zygosaccharomyces rouxii

NCBI taxonomy Id: 559307
Other names: Z. rouxii CBS 732, Zygosaccharomyces rouxii CBS 732

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5DPU9_ZYGRC	C5DQ85_ZYGRC	C5DPU9	C5DQ85	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.786
C5DPU9_ZYGRC	C5DQJ3_ZYGRC	C5DPU9	C5DQJ3	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0B00770p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.935
C5DPU9_ZYGRC	C5DRE4_ZYGRC	C5DPU9	C5DRE4	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0B07810p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.539
C5DPU9_ZYGRC	C5DTP3_ZYGRC	C5DPU9	C5DTP3	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0C10186p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.926
C5DPU9_ZYGRC	C5DZ13_ZYGRC	C5DPU9	C5DZ13	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0F17402p.	0.836
C5DPU9_ZYGRC	C5DZ88_ZYGRC	C5DPU9	C5DZ88	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0G02354p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.951
C5DPU9_ZYGRC	C5DZD1_ZYGRC	C5DPU9	C5DZD1	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0G03366p.	0.712
C5DPU9_ZYGRC	C5DZJ9_ZYGRC	C5DPU9	C5DZJ9	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0G05060p.	0.570
C5DPU9_ZYGRC	C5E4A9_ZYGRC	C5DPU9	C5E4A9	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0E04378p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.930
C5DQ85_ZYGRC	C5DPU9_ZYGRC	C5DQ85	C5DPU9	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.786
C5DQ85_ZYGRC	C5DQJ3_ZYGRC	C5DQ85	C5DQJ3	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0B00770p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.769
C5DQ85_ZYGRC	C5DRE4_ZYGRC	C5DQ85	C5DRE4	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0B07810p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.719
C5DQ85_ZYGRC	C5DTP3_ZYGRC	C5DQ85	C5DTP3	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0C10186p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.433
C5DQ85_ZYGRC	C5DZ13_ZYGRC	C5DQ85	C5DZ13	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0F17402p.	0.425
C5DQ85_ZYGRC	C5DZ88_ZYGRC	C5DQ85	C5DZ88	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0G02354p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.699
C5DQ85_ZYGRC	C5E4A9_ZYGRC	C5DQ85	C5E4A9	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0E04378p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.767
C5DQJ3_ZYGRC	C5DPU9_ZYGRC	C5DQJ3	C5DPU9	ZYRO0B00770p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0A06270p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.935
C5DQJ3_ZYGRC	C5DQ85_ZYGRC	C5DQJ3	C5DQ85	ZYRO0B00770p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0A09482p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.769
C5DQJ3_ZYGRC	C5DRE4_ZYGRC	C5DQJ3	C5DRE4	ZYRO0B00770p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0B07810p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.826
C5DQJ3_ZYGRC	C5DTP3_ZYGRC	C5DQJ3	C5DTP3	ZYRO0B00770p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	ZYRO0C10186p; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.914