STRINGSTRING
C5DZM8_ZYGRC C5DZM8_ZYGRC LSM4 LSM4 C5E022_ZYGRC C5E022_ZYGRC C5DR11_ZYGRC C5DR11_ZYGRC C5DR45_ZYGRC C5DR45_ZYGRC LSM3 LSM3 C5DUS5_ZYGRC C5DUS5_ZYGRC LSM1 LSM1 C5DW52_ZYGRC C5DW52_ZYGRC C5DWF2_ZYGRC C5DWF2_ZYGRC C5DXA9_ZYGRC C5DXA9_ZYGRC C5DYM4_ZYGRC C5DYM4_ZYGRC C5DZQ2_ZYGRC C5DZQ2_ZYGRC C5E4S7_ZYGRC C5E4S7_ZYGRC C5E485_ZYGRC C5E485_ZYGRC C5E481_ZYGRC C5E481_ZYGRC C5E1V6_ZYGRC C5E1V6_ZYGRC C5E0Q2_ZYGRC C5E0Q2_ZYGRC LSM8 LSM8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C5DZM8_ZYGRCZYRO0G05720p. (116 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (173 aa)
C5E022_ZYGRCU6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
C5DR11_ZYGRCZYRO0B04686p. (324 aa)
C5DR45_ZYGRCZYRO0B05456p. (143 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (85 aa)
C5DUS5_ZYGRCZYRO0D00990p. (99 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (185 aa)
C5DW52_ZYGRCSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (93 aa)
C5DWF2_ZYGRCSmall nuclear ribonucleoprotein Sm D2. (110 aa)
C5DXA9_ZYGRCSmall nuclear ribonucleoprotein G. (76 aa)
C5DYM4_ZYGRCSmall nuclear ribonucleoprotein Sm D3. (100 aa)
C5DZQ2_ZYGRCZYRO0G06314p. (188 aa)
C5E4S7_ZYGRCZYRO0E08448p. (149 aa)
C5E485_ZYGRCZYRO0E03762p. (98 aa)
C5E481_ZYGRCZYRO0E03630p. (492 aa)
C5E1V6_ZYGRCZYRO0G01804p. (115 aa)
C5E0Q2_ZYGRCZYRO0G14696p. (86 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (103 aa)
Your Current Organism:
Zygosaccharomyces rouxii
NCBI taxonomy Id: 559307
Other names: Z. rouxii CBS 732, Zygosaccharomyces rouxii CBS 732
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