STRINGSTRING
ORB08500.1 ORB08500.1 ORB08501.1 ORB08501.1 ORB08570.1 ORB08570.1 ORB08502.1 ORB08502.1 ORB08503.1 ORB08503.1 ORB08505.1 ORB08505.1 BST30_08005 BST30_08005 ORB04024.1 ORB04024.1 ORB04025.1 ORB04025.1 ORA99078.1 ORA99078.1 ORA99079.1 ORA99079.1 ORA98267.1 ORA98267.1 ORA98268.1 ORA98268.1 ORA96617.1 ORA96617.1 ORA96013.1 ORA96013.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ORB08500.1Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
ORB08501.1Type VII secretion-associated serine protease mycosin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (435 aa)
ORB08570.1Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
ORB08502.1Type VII secretion protein EccCb; Derived by automated computational analysis using gene prediction method: Protein Homology. (1230 aa)
ORB08503.1Type VII secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
ORB08505.1WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family. (98 aa)
BST30_08005Transposase; Frameshifted; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
ORB04024.1Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
ORB04025.1Type VII secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
ORA99078.1Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology. (1387 aa)
ORA99079.1Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)
ORA98267.1Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology. (495 aa)
ORA98268.1Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology. (1407 aa)
ORA96617.1Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
ORA96013.1Type VII secretion-associated serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
Your Current Organism:
Mycobacterium mantenii
NCBI taxonomy Id: 560555
Other names: CIP 109863, DSM 45255, JCM 18113, M. mantenii, Mycobacterium mantenii van Ingen et al. 2009, Mycobacterium sp. E152, Mycobacterium sp. E2660, Mycobacterium sp. E3078, Mycobacterium sp. E3121, Mycobacterium sp. NLA000401474, Mycobacterium sp. NLA000800224, strain NLA000401474
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