STRINGSTRING
psbB psbB AFY81041.1 AFY81041.1 AFY81093.1 AFY81093.1 AFY85004.1 AFY85004.1 AFY84113.1 AFY84113.1 AFY84109.1 AFY84109.1 psbA psbA psbC psbC psbD-2 psbD-2 AFY80462.1 AFY80462.1 petD petD psbD psbD AFY81111.1 AFY81111.1 AFY81094.1 AFY81094.1 psbA-2 psbA-2 AFY85035.1 AFY85035.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psbBPhotosystem II chlorophyll-binding protein CP47; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily. (508 aa)
AFY81041.1Hypothetical protein. (239 aa)
AFY81093.1Conserved domain protein, TIGR02271+C111; PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain. (292 aa)
AFY85004.1PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosystem II, DI subunit (also called Q(B)). (360 aa)
AFY84113.1PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosystem II, DI subunit (also called Q(B)). (360 aa)
AFY84109.1PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosystem II, DI subunit (also called Q(B)). (360 aa)
psbAPhotosystem II DI subunit, Q(B) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
psbCPhotosystem II reaction center protein P6/CP43; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily. (461 aa)
psbD-2Photosystem II DII subunit, Q(A) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII c [...] (352 aa)
AFY80462.1Putative membrane protein; PFAM: Protein of unknown function (DUF1269). (236 aa)
petDCytochrome b6/f complex subunit IV; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (160 aa)
psbDPhotosystem II DII subunit, Q(A) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII c [...] (352 aa)
AFY81111.1Hypothetical protein. (181 aa)
AFY81094.1Hypothetical protein; PFAM: Domain of unknown function (DUF2382). (311 aa)
psbA-2Photosystem II DI subunit, Q(B) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
AFY85035.1Conserved domain protein, TIGR02271+C111; PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain. (325 aa)
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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