STRINGSTRING
hfq hfq SDB98957.1 SDB98957.1 SDB98985.1 SDB98985.1 SDB99013.1 SDB99013.1 SDC07829.1 SDC07829.1 SDC07908.1 SDC07908.1 SDC07947.1 SDC07947.1 SDC09222.1 SDC09222.1 SDC09264.1 SDC09264.1 SDC09304.1 SDC09304.1 SDC09353.1 SDC09353.1 trpE trpE SDC14532.1 SDC14532.1 SDC14569.1 SDC14569.1 SDC14727.1 SDC14727.1 SDC14766.1 SDC14766.1 SDC14807.1 SDC14807.1 SDC14995.1 SDC14995.1 SDC16036.1 SDC16036.1 TrpG TrpG yajC yajC SDC32080.1 SDC32080.1 SDC32102.1 SDC32102.1 SDC57592.1 SDC57592.1 SDC57619.1 SDC57619.1 SDC57649.1 SDC57649.1 SDC57789.1 SDC57789.1 SDC57819.1 SDC57819.1 SDC57851.1 SDC57851.1 potA potA SDC60470.1 SDC60470.1 SDC60536.1 SDC60536.1 SDC60611.1 SDC60611.1 CerI CerI SDC64341.1 SDC64341.1 SDC65670.1 SDC65670.1 SDC65706.1 SDC65706.1 SDC65746.1 SDC65746.1 SDC65766.1 SDC65766.1 SDC65806.1 SDC65806.1 SDC80300.1 SDC80300.1 ftsY ftsY SDC86260.1 SDC86260.1 SDC86295.1 SDC86295.1 SDC86333.1 SDC86333.1 SDC86374.1 SDC86374.1 SDC76370.1 SDC76370.1 gsiD gsiD SDC76645.1 SDC76645.1 Zur Zur SDD03790.1 SDD03790.1 SDC94080.1 SDC94080.1 secA secA yidC yidC ffh ffh SDD31770.1 SDD31770.1 SDD31866.1 SDD31866.1 SDD31902.1 SDD31902.1 SDD31941.1 SDD31941.1 secY secY SDD38948.1 SDD38948.1 SDD38985.1 SDD38985.1 SDD39024.1 SDD39024.1 SDD39151.1 SDD39151.1 SDD40363.1 SDD40363.1 secB secB SDD58065.1 SDD58065.1 SDD58100.1 SDD58100.1 SDD58135.1 SDD58135.1 SDD58169.1 SDD58169.1 SDD62961.1 SDD62961.1 SDD62998.1 SDD62998.1 SDD63034.1 SDD63034.1 SDD63067.1 SDD63067.1 SDD78420.1 SDD78420.1 SDD78451.1 SDD78451.1 SDD78516.1 SDD78516.1 SDD78561.1 SDD78561.1 SDD73267.1 SDD73267.1 SDD73303.1 SDD73303.1 SDD73344.1 SDD73344.1 SDD73383.1 SDD73383.1 SDD73696.1 SDD73696.1 SDD73727.1 SDD73727.1 SDD73798.1 SDD73798.1 SDD73833.1 SDD73833.1 SDD75116.1 SDD75116.1 SDD75385.1 SDD75385.1 SDD75413.1 SDD75413.1 SDD75467.1 SDD75467.1 SDD83814.1 SDD83814.1 SDD82278.1 SDD82278.1 SDD83762.1 SDD83762.1 SDD83787.1 SDD83787.1 SDD87198.1 SDD87198.1 SDD88536.1 SDD88536.1 SDD88571.1 SDD88571.1 SDD88606.1 SDD88606.1 SDD88633.1 SDD88633.1 SDD92515.1 SDD92515.1 SDD98684.1 SDD98684.1 SDE00019.1 SDE00019.1 SDE07026.1 SDE07026.1 SDE07056.1 SDE07056.1 SDE07091.1 SDE07091.1 SDE07201.1 SDE07201.1 SDE22381.1 SDE22381.1 SDE22408.1 SDE22408.1 SDE22421.1 SDE22421.1 SDE22450.1 SDE22450.1 SDE24681.1 SDE24681.1 SDE28776.1 SDE28776.1 SDE28112.1 SDE28112.1 SDE28140.1 SDE28140.1 SDE28167.1 SDE28167.1 SDE28198.1 SDE28198.1 SDE28226.1 SDE28226.1 SDE31611.1 SDE31611.1 secE secE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hfqRNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (79 aa)
SDB98957.1ABC-type spermidine/putrescine transport system, permease component I. (562 aa)
SDB98985.1Putative spermidine/putrescine transport system substrate-binding protein. (346 aa)
SDB99013.1Putative spermidine/putrescine transport system ATP-binding protein. (342 aa)
SDC07829.1Putative spermidine/putrescine transport system substrate-binding protein. (357 aa)
SDC07908.1Putative spermidine/putrescine transport system permease protein. (325 aa)
SDC07947.1Putative spermidine/putrescine transport system permease protein. (265 aa)
SDC09222.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (695 aa)
SDC09264.1Peptide/nickel transport system permease protein. (483 aa)
SDC09304.1Peptide/nickel transport system permease protein. (378 aa)
SDC09353.1Peptide/nickel transport system substrate-binding protein. (556 aa)
trpEAnthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] (504 aa)
SDC14532.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (430 aa)
SDC14569.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
SDC14727.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (275 aa)
SDC14766.1Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (261 aa)
SDC14807.1Branched-chain amino acid transport system substrate-binding protein. (394 aa)
SDC14995.13-deoxy-D-arabinoheptulosonate-7-phosphate synthase. (456 aa)
SDC16036.1Peptide/nickel transport system substrate-binding protein. (607 aa)
TrpGAnthranilate synthase component 2. (193 aa)
yajCPreprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (95 aa)
SDC32080.1Peptide/nickel transport system permease protein. (335 aa)
SDC32102.1Peptide/nickel transport system substrate-binding protein. (565 aa)
SDC57592.1Long-chain acyl-CoA synthetase. (662 aa)
SDC57619.1Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (284 aa)
SDC57649.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (317 aa)
SDC57789.1Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family. (358 aa)
SDC57819.1Branched-chain amino acid transport system substrate-binding protein. (431 aa)
SDC57851.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (274 aa)
potAPutative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (367 aa)
SDC60470.1Putative spermidine/putrescine transport system substrate-binding protein. (371 aa)
SDC60536.1Putative spermidine/putrescine transport system permease protein. (590 aa)
SDC60611.1Putative spermidine/putrescine transport system permease protein. (394 aa)
CerIAcyl homoserine lactone synthase. (213 aa)
SDC64341.1Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. (311 aa)
SDC65670.1Branched-chain amino acid transport system ATP-binding protein. (229 aa)
SDC65706.1Branched-chain amino acid transport system ATP-binding protein. (249 aa)
SDC65746.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
SDC65766.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (306 aa)
SDC65806.1Branched-chain amino acid transport system substrate-binding protein. (378 aa)
SDC80300.1Glycosyl transferase, group 2 family protein; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (628 aa)
ftsYFused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (372 aa)
SDC86260.1Peptide/nickel transport system substrate-binding protein. (501 aa)
SDC86295.1Peptide/nickel transport system permease protein. (304 aa)
SDC86333.1Peptide/nickel transport system permease protein. (306 aa)
SDC86374.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (541 aa)
SDC76370.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (619 aa)
gsiDPeptide/nickel transport system permease protein. (279 aa)
SDC76645.1Peptide/nickel transport system substrate-binding protein. (495 aa)
ZurFur family transcriptional regulator, zinc uptake regulator; Belongs to the Fur family. (159 aa)
SDD03790.1Branched-chain amino acid transport system substrate-binding protein. (433 aa)
SDC94080.1Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (127 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (910 aa)
yidCYidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (610 aa)
ffhSignal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...] (500 aa)
SDD31770.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (322 aa)
SDD31866.1Peptide/nickel transport system permease protein. (325 aa)
SDD31902.1Peptide/nickel transport system permease protein. (330 aa)
SDD31941.1Peptide/nickel transport system substrate-binding protein. (525 aa)
secYProtein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (455 aa)
SDD38948.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (546 aa)
SDD38985.1Peptide/nickel transport system permease protein. (271 aa)
SDD39024.1Peptide/nickel transport system permease protein. (313 aa)
SDD39151.1Peptide/nickel transport system substrate-binding protein. (489 aa)
SDD40363.1Calx-beta domain-containing protein. (3782 aa)
secBPreprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (162 aa)
SDD58065.1Peptide/nickel transport system permease protein. (331 aa)
SDD58100.1Peptide/nickel transport system permease protein. (398 aa)
SDD58135.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (549 aa)
SDD58169.1Peptide/nickel transport system substrate-binding protein. (517 aa)
SDD62961.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (562 aa)
SDD62998.1Peptide/nickel transport system permease protein. (399 aa)
SDD63034.1Peptide/nickel transport system permease protein. (328 aa)
SDD63067.1Peptide/nickel transport system substrate-binding protein. (640 aa)
SDD78420.1ABC-type branched-chain amino acid transport system, substrate-binding protein. (448 aa)
SDD78451.1Branched-chain amino acid ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (335 aa)
SDD78516.1Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (251 aa)
SDD78561.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (251 aa)
SDD73267.1Branched-chain amino acid transport system substrate-binding protein. (400 aa)
SDD73303.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (288 aa)
SDD73344.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (311 aa)
SDD73383.1Branched-chain amino acid transport system ATP-binding protein. (245 aa)
SDD73696.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (333 aa)
SDD73727.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (325 aa)
SDD73798.1Peptide/nickel transport system permease protein. (325 aa)
SDD73833.1Peptide/nickel transport system substrate-binding protein. (540 aa)
SDD75116.1Peptide/nickel transport system substrate-binding protein. (554 aa)
SDD75385.1Peptide/nickel transport system permease protein. (294 aa)
SDD75413.1Peptide/nickel transport system substrate-binding protein. (516 aa)
SDD75467.1Peptide/nickel transport system ATP-binding protein/glutathione transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (559 aa)
SDD83814.1Peptide/nickel transport system substrate-binding protein. (525 aa)
SDD82278.1Transporter family-2 protein. (149 aa)
SDD83762.1Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (627 aa)
SDD83787.1Peptide/nickel transport system permease protein. (315 aa)
SDD87198.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (241 aa)
SDD88536.1Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (324 aa)
SDD88571.1Putative spermidine/putrescine transport system substrate-binding protein. (423 aa)
SDD88606.1Putative spermidine/putrescine transport system permease protein. (288 aa)
SDD88633.1Putative spermidine/putrescine transport system permease protein. (278 aa)
SDD92515.1Ig-like domain (group 3). (1461 aa)
SDD98684.1Riboflavin biosynthesis protein RibD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase. (308 aa)
SDE00019.1Putative spermidine/putrescine transport system ATP-binding protein/spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (357 aa)
SDE07026.1Peptide/nickel transport system permease protein. (342 aa)
SDE07056.1Peptide/nickel transport system permease protein. (290 aa)
SDE07091.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (558 aa)
SDE07201.1Peptide/nickel transport system substrate-binding protein. (519 aa)
SDE22381.1Peptide/nickel transport system substrate-binding protein. (516 aa)
SDE22408.1Peptide/nickel transport system permease protein. (314 aa)
SDE22421.1Peptide/nickel transport system permease protein. (299 aa)
SDE22450.1Peptide/nickel transport system ATP-binding protein/peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (688 aa)
SDE24681.1Two-component system, OmpR family, response regulator. (222 aa)
SDE28776.1Quinol monooxygenase YgiN. (96 aa)
SDE28112.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (327 aa)
SDE28140.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (317 aa)
SDE28167.1Oligopeptide transport system permease protein. (311 aa)
SDE28198.1Oligopeptide transport system permease protein. (309 aa)
SDE28226.1Oligopeptide transport system substrate-binding protein. (538 aa)
SDE31611.1Long-chain acyl-CoA synthetase. (410 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (67 aa)
Your Current Organism:
Mameliella alba
NCBI taxonomy Id: 561184
Other names: Alkalimicrobium pacificum, Alkalimicrobium pacificum Zhang et al. 2015, Antarctobacter sp. JLT354-W, CGMCC 1.12763 [[Alkalimicrobium pacificum]], CGMCC 1.12986 [[Ponticoccus lacteus]], CGMCC 1.7290, JCM 19851 [[Alkalimicrobium pacificum]], JCM 30230 [[Mameliella atlantica]], JCM 30379 [[Ponticoccus lacteus]], KCTC 42178 [[Mameliella phaeodactyli]], LMG 24665, LMG 28107 [[Alkalimicrobium pacificum]], LMG:24665, LMG:28107 [[Alkalimicrobium pacificum]], M. alba, MCCC 1A07531 [[Mameliella atlantica]], MCCC 1A09948 [[Alkalimicrobium pacificum]], MCCC 1K00273 [[Mameliella phaeodactyli]], Mameliella alba Zheng et al. 2010 emend. Liu et al. 2018, Mameliella atlantica, Mameliella atlantica Xu et al. 2015, Mameliella phaeodactyli, Mameliella phaeodactyli Chen et al. 2015, Mameliella sp. L6M1-5, Ponticoccus lacteus, Ponticoccus lacteus Yang et al. 2015, Ponticoccus sp. UMTAT08, Rhodobacteraceae bacterium F15, Rhodobacteraceae bacterium KD53, Roseobacter sp. JL-351, proteobacterium JL351, strain F15 [[Alkalimicrobium pacificum]], strain JL351 [[Ponticoccus lacteus]], strain JLT354-W, strain KD53 [[Mameliella phaeodactyli]], strain L6M1-5 [[Mameliella atlantica]]
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