STRINGSTRING
ACT04975.1 ACT04975.1 ACT05136.1 ACT05136.1 ACT05200.1 ACT05200.1 ACT05413.1 ACT05413.1 ACT05692.1 ACT05692.1 ACT05832.1 ACT05832.1 ACT05957.1 ACT05957.1 ACT06068.1 ACT06068.1 ACT06226.1 ACT06226.1 ACT06374.1 ACT06374.1 cheB cheB ACT06399.1 ACT06399.1 ACT06641.1 ACT06641.1 ACT06699.1 ACT06699.1 ACT06745.1 ACT06745.1 ACT06788.1 ACT06788.1 ACT06883.1 ACT06883.1 ACT06890.1 ACT06890.1 rssB rssB ACT07168.1 ACT07168.1 ACT07284.1 ACT07284.1 ACT07446.1 ACT07446.1 ACT07598.1 ACT07598.1 ACT07753.1 ACT07753.1 rcsB rcsB rcsC rcsC ACT07928.1 ACT07928.1 ACT08045.1 ACT08045.1 ACT08095.1 ACT08095.1 ACT08315.1 ACT08315.1 ACT08589.1 ACT08589.1 ACT08831.1 ACT08831.1 ACT08898.1 ACT08898.1 ntrC ntrC ACT08973.1 ACT08973.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACT04975.1Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: cps:CPS_2121 sigma-54 dependent DNA-binding response regulator. (466 aa)
ACT05136.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA4108 osmolarity response regulator. (239 aa)
ACT05200.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA4044 DNA-binding transcriptional regulator BasR. (232 aa)
ACT05413.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA3893 two-component response regulator. (238 aa)
ACT05692.1Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Hpt domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA3571 hybrid sensory histidine kinase BarA. (922 aa)
ACT05832.1Two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: ent:Ent638_2723 putative two-component response-regulatory protein YehT. (241 aa)
ACT05957.1Putative two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: eca:ECA3255 two-component system response regulator. (445 aa)
ACT06068.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA3189 DNA-binding transcriptional regulator BaeR. (243 aa)
ACT06226.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: spe:Spro_3340 two component transcriptional regulator. (224 aa)
ACT06374.1Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: eca:ECA2882 response regulator. (220 aa)
cheBResponse regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (350 aa)
ACT06399.1PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA1694 chemotaxis regulatory protein CheY. (129 aa)
ACT06641.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA2013 DNA-binding transcriptional regulator RstA. (248 aa)
ACT06699.1Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: eca:ECA2028 transcriptional regulator NarL. (215 aa)
ACT06745.1Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: eca:ECA2089 two-component response regulator. (213 aa)
ACT06788.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA2445 DNA-binding transcriptional regulator PhoP. (222 aa)
ACT06883.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA0785 two component system response regulator. (227 aa)
ACT06890.1Response regulator receiver protein; KEGG: eca:ECA0791 hypothetical protein. (401 aa)
rssBResponse regulator receiver protein; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation. (338 aa)
ACT07168.1Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA2578 two-component response regulator. (241 aa)
ACT07284.1Two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: cko:CKO_00419 hypothetical protein. (245 aa)
ACT07446.1PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: eca:ECA1568 putative chemotaxis signal transduction protein. (325 aa)
ACT07598.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcj:BCAM0111 two-component regulatory system, response regulator protein. (245 aa)
ACT07753.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA1338 DNA-binding transcriptional activator KdpE. (229 aa)
rcsBTwo component transcriptional regulator, LuxR family; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. (216 aa)
rcsCHistidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (955 aa)
ACT07928.1Two component transcriptional regulator PhoB, winged helix family; KEGG: eca:ECA1110 phosphate regulon response regulator; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (229 aa)
ACT08045.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: kpe:KPK_2665 DNA-binding response regulator. (231 aa)
ACT08095.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA0889 two-component system response regulator. (232 aa)
ACT08315.1Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ecg:E2348C_3984 DNA-binding response regulator UhpA in two-component regulatory system wtih UhpB. (196 aa)
ACT08589.1Multi-sensor hybrid histidine kinase; KEGG: eca:ECA0314 aerobic respiration control sensor protein ArcB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Hpt domain protein; PAS domain containing protein. (779 aa)
ACT08831.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA4311 DNA-binding transcriptional regulator CpxR. (232 aa)
ACT08898.1Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA4398 DNA-binding transcriptional activator DcuR. (240 aa)
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (470 aa)
ACT08973.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA0008 two-component system response regulator. (223 aa)
Your Current Organism:
Dickeya chrysanthemi
NCBI taxonomy Id: 561229
Other names: D. chrysanthemi Ech1591, Dickeya chrysanthemi Ech1591, Dickeya dadantii Ech1591, Dickeya zeae Ech1591
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