STRINGSTRING
PC1_2838 PC1_2838 PC1_4282 PC1_4282 PC1_4263 PC1_4263 PC1_4246 PC1_4246 rpoZ rpoZ PC1_4183 PC1_4183 PC1_4178 PC1_4178 PC1_4176 PC1_4176 PC1_4175 PC1_4175 PC1_4174 PC1_4174 PC1_4160 PC1_4160 PC1_4111 PC1_4111 PC1_4110 PC1_4110 PC1_4109 PC1_4109 PC1_4012 PC1_4012 PC1_3978 PC1_3978 PC1_3901 PC1_3901 PC1_3867 PC1_3867 PC1_3866 PC1_3866 PC1_3865 PC1_3865 PC1_3841 PC1_3841 PC1_3827 PC1_3827 PC1_3825 PC1_3825 secY secY rpoA rpoA PC1_3751 PC1_3751 PC1_3730 PC1_3730 PC1_3694 PC1_3694 PC1_3661 PC1_3661 secA secA PC1_3567 PC1_3567 PC1_3563 PC1_3563 PC1_3517 PC1_3517 PC1_3502 PC1_3502 lplT lplT PC1_3428 PC1_3428 msrA msrA PC1_3340 PC1_3340 PC1_3335 PC1_3335 PC1_3331 PC1_3331 PC1_3326 PC1_3326 PC1_3219 PC1_3219 PC1_3088 PC1_3088 ndk ndk mdtD mdtD PC1_2848 PC1_2848 PC1_2837 PC1_2837 PC1_2836 PC1_2836 PC1_2676 PC1_2676 PC1_2493 PC1_2493 PC1_2484 PC1_2484 PC1_2483 PC1_2483 katG katG PC1_2360 PC1_2360 PC1_2359 PC1_2359 PC1_2342 PC1_2342 PC1_2330 PC1_2330 tpx tpx PC1_2266 PC1_2266 PC1_2182 PC1_2182 PC1_2177 PC1_2177 PC1_2176 PC1_2176 PC1_2149 PC1_2149 PC1_2146 PC1_2146 PC1_2131 PC1_2131 PC1_2101 PC1_2101 PC1_2064 PC1_2064 PC1_2042 PC1_2042 PC1_1987 PC1_1987 PC1_1986 PC1_1986 PC1_1896 PC1_1896 PC1_1849 PC1_1849 PC1_1838 PC1_1838 PC1_1784 PC1_1784 msbA msbA PC1_1723 PC1_1723 PC1_1718 PC1_1718 PC1_1717 PC1_1717 PC1_1674 PC1_1674 PC1_1667 PC1_1667 PC1_1651 PC1_1651 PC1_1645 PC1_1645 PC1_1640 PC1_1640 PC1_1611 PC1_1611 PC1_1531 PC1_1531 PC1_1499 PC1_1499 PC1_1493 PC1_1493 PC1_1492 PC1_1492 PC1_1491 PC1_1491 PC1_1459 PC1_1459 PC1_1458 PC1_1458 PC1_1452 PC1_1452 PC1_1441 PC1_1441 PC1_1440 PC1_1440 PC1_1437 PC1_1437 PC1_1430 PC1_1430 PC1_1426 PC1_1426 PC1_1425 PC1_1425 PC1_1420 PC1_1420 PC1_1297 PC1_1297 PC1_1237 PC1_1237 PC1_1144 PC1_1144 PC1_1135 PC1_1135 PC1_1120 PC1_1120 PC1_1109 PC1_1109 PC1_1059 PC1_1059 PC1_1058 PC1_1058 PC1_1057 PC1_1057 PC1_1044 PC1_1044 PC1_1037 PC1_1037 PC1_1025 PC1_1025 secF secF secD secD PC1_1015 PC1_1015 PC1_1010 PC1_1010 PC1_0988 PC1_0988 PC1_0841 PC1_0841 PC1_0813 PC1_0813 PC1_0797 PC1_0797 PC1_0676 PC1_0676 PC1_0675 PC1_0675 PC1_0674 PC1_0674 PC1_0592 PC1_0592 PC1_0575 PC1_0575 PC1_0569 PC1_0569 PC1_0461 PC1_0461 PC1_0428 PC1_0428 PC1_0427 PC1_0427 PC1_0426 PC1_0426 PC1_0355 PC1_0355 PC1_0283 PC1_0283 PC1_0207 PC1_0207 rpoC rpoC rpoB rpoB secE secE tuf tuf PC1_0138 PC1_0138 PC1_0089 PC1_0089 PC1_0088 PC1_0088 PC1_0065 PC1_0065 PC1_0046 PC1_0046 PC1_0045 PC1_0045 PC1_0044 PC1_0044 PC1_0027 PC1_0027 ssuD ssuD PC1_0020 PC1_0020 PC1_0019 PC1_0019 PC1_0015 PC1_0015
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PC1_2838PFAM: Necrosis inducing; KEGG: eca:ECA3087 hypothetical protein. (263 aa)
PC1_4282PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4457 putative methyl viologen resistance protein. (500 aa)
PC1_4263Phosphate ABC transporter, periplasmic phosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (346 aa)
PC1_4246PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eca:ECA0002 DNA-binding transcriptional regulator AsnC. (153 aa)
rpoZDNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (91 aa)
PC1_4183PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: eca:ECA0065 hypothetical protein. (301 aa)
PC1_4178PFAM: Luciferase-like monooxygenase; KEGG: eca:ECA0071 putative monooxygenase. (344 aa)
PC1_4176PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0073 ABC transporter permease protein. (286 aa)
PC1_4175PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0074 ABC transporter permease protein. (314 aa)
PC1_4174PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0075 ABC-type transporter, substrate binding protein. (545 aa)
PC1_4160Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (208 aa)
PC1_4111PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0135 ABC transporter permease protein. (299 aa)
PC1_4110PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0136 ABC transporter permease protein. (306 aa)
PC1_4109PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0137 ABC transporter periplasmic binding protein. (513 aa)
PC1_4012TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: eca:ECA4212 thioredoxin; Belongs to the thioredoxin family. (108 aa)
PC1_3978KEGG: eca:ECA4186 hypothetical protein. (205 aa)
PC1_3901PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4111 transporter. (416 aa)
PC1_3867PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4076 ABC transporter, substrate binding protein. (536 aa)
PC1_3866PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4075 ABC transporter permease protein. (346 aa)
PC1_3865PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4074 ABC transporter permease protein. (307 aa)
PC1_3841PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: eca:ECA4049 FKBP-type peptidyl-prolyl cis-trans isomerase. (272 aa)
PC1_3827TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: esa:ESA_04403 elongation factor Tu. (394 aa)
PC1_3825Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (157 aa)
secYPreprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (443 aa)
rpoADNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (329 aa)
PC1_3751PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3958 transporter. (410 aa)
PC1_3730Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)
PC1_3694PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3935 major facilitator transporter. (433 aa)
PC1_3661PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA3884 putative transport protein. (445 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (900 aa)
PC1_3567Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (629 aa)
PC1_3563PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_3035 major facilitator transporter. (394 aa)
PC1_3517Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (143 aa)
PC1_3502PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eca:ECA3668 transcription regulator AsnC. (159 aa)
lplTMajor facilitator superfamily MFS_1; Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell; Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family. (407 aa)
PC1_3428PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: eca:ECA3607 peptidyl-prolyl cis-trans isomerase. (206 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (212 aa)
PC1_3340TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA3522 alpha-ketoglutarate transporter. (426 aa)
PC1_3335TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: eca:ECA3517 thioredoxin 2; Belongs to the thioredoxin family. (139 aa)
PC1_3331TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3513 multidrug resistance protein B. (511 aa)
PC1_3326PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3508 putative transport protein. (406 aa)
PC1_3219PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3375 transporter. (396 aa)
PC1_3088PFAM: major facilitator superfamily MFS_1; KEGG: smt:Smal_0074 major facilitator superfamily MFS_1. (408 aa)
ndkNucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (142 aa)
mdtDTIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3187 multidrug efflux system protein MdtE. (466 aa)
PC1_2848PFAM: Luciferase-like monooxygenase; KEGG: eca:ECA3097 monooxygenase. (341 aa)
PC1_2837PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll7282 multidrug ABC transporter. (398 aa)
PC1_2836PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: smd:Smed_5879 putative transcriptional regulator, AsnC family. (165 aa)
PC1_2676TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2927 transporter. (407 aa)
PC1_2493PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1808 transporter. (484 aa)
PC1_2484PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1817 transporter. (397 aa)
PC1_2483PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1818 putative transporter. (402 aa)
katGCatalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (724 aa)
PC1_2360PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: spe:Spro_3132 major facilitator transporter. (393 aa)
PC1_2359PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bpy:Bphyt_2726 transcriptional regulator, AsnC family. (167 aa)
PC1_2342PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1977 peptide transport periplasmic protein. (580 aa)
PC1_2330TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF638 hemagglutinin/hemolysin putative; KEGG: yps:YPTB2527 putative hemolysin. (2600 aa)
tpxRedoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (167 aa)
PC1_2266PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: eca:ECA2023 putative siderophore-interacting protein. (267 aa)
PC1_2182PFAM: Pectate lyase; KEGG: eca:ECA2112 type III effector protein. (489 aa)
PC1_2177TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: eca:ECA2117 hemolysin/hemagglutinin-like protein. (1730 aa)
PC1_2176TIGRFAM: adhesin HecA family; PFAM: protein of unknown function DUF638 hemagglutinin/hemolysin putative; Haemagluttinin repeat-containing protein; KEGG: eca:ECA2118 hemolysin/hemagglutinin-like protein HecA precursor. (3300 aa)
PC1_2149KEGG: eca:ECA2158 hypothetical protein. (442 aa)
PC1_2146PFAM: Luciferase-like monooxygenase; KEGG: eca:ECA2161 putative luciferase-like monooxygenase. (326 aa)
PC1_2131KEGG: eca:ECA2173 hypothetical protein. (354 aa)
PC1_2101Superoxide dismutase copper/zinc binding; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (174 aa)
PC1_2064PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH3886 multidrug-efflux transporter. (411 aa)
PC1_2042PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2260 putative transporter. (422 aa)
PC1_1987PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2322 oligopeptide transport system permease protein. (302 aa)
PC1_1986PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2323 oligopeptide transporter permease. (306 aa)
PC1_1896PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eca:ECA2414 putative ABC transporter ATP-binding protein. (572 aa)
PC1_1849PFAM: Mammalian cell entry related domain protein; KEGG: eca:ECA2463 hypothetical protein. (880 aa)
PC1_1838Ferroxidase; Iron-storage protein. (168 aa)
PC1_1784PFAM: porin Gram-negative type; KEGG: eca:ECA2542 outer membrane protein; Belongs to the Gram-negative porin family. (373 aa)
msbALipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (597 aa)
PC1_1723PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2643 MFS family transporter. (384 aa)
PC1_1718PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eca:ECA2648 leucine-responsive transcriptional regulator. (164 aa)
PC1_1717TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA2649 thioredoxin reductase. (320 aa)
PC1_1674PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppf:Pput_1348 ABC transporter related. (610 aa)
PC1_1667TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: eca:ECA2714 alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (373 aa)
PC1_1651TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2730 sugar efflux transporter. (392 aa)
PC1_1645PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2736 putative ABC transporter, periplasmic binding protein. (602 aa)
PC1_1640TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2741 bicyclomycin/multidrug efflux system. (396 aa)
PC1_1611KEGG: cko:CKO_03516 hypothetical protein. (145 aa)
PC1_1531PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2801 periplasmic dipeptide transport protein. (531 aa)
PC1_1499PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4186 hypothetical protein. (394 aa)
PC1_1493PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2832 putative ABC transporter permease protein. (301 aa)
PC1_1492PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2833 putative ABC transporter permease protein. (306 aa)
PC1_1491PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2834 putative ABC transporter periplasmic binding protein. (514 aa)
PC1_1459PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1574 transporter. (411 aa)
PC1_1458TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1573 transporter. (399 aa)
PC1_1452TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: psa:PST_3610 probable MFS transporter. (418 aa)
PC1_1441PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cko:CKO_01251 hypothetical protein. (606 aa)
PC1_1440PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: vei:Veis_2441 ABC transporter related. (608 aa)
PC1_1437PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO_2601 hypothetical protein. (415 aa)
PC1_1430PFAM: Thioredoxin domain; KEGG: eca:ECA1555 hypothetical protein. (597 aa)
PC1_1426PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1550 putative transport system membrane protein. (415 aa)
PC1_1425PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1549 putative ABC transporter substrate-binding protein. (503 aa)
PC1_1420TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; Osmosensory transporter coiled coil; major facilitator superfamily MFS_1; KEGG: eca:ECA1546 proline/glycine betaine transporter. (500 aa)
PC1_1297PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: eca:ECA1418 protein-tyrosine-phosphatase. (144 aa)
PC1_12372-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (407 aa)
PC1_1144TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: eca:ECA1267 thioredoxin. (421 aa)
PC1_1135Peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: eca:ECA1260 thioredoxin-dependent thiol peroxidase. (155 aa)
PC1_1120PFAM: Thioredoxin domain; KEGG: eca:ECA1220 putative thioredoxin. (286 aa)
PC1_1109PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1205 hypothetical protein. (389 aa)
PC1_1059PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eca:ECA1159 putative multidrug transporter membraneATP-binding components. (591 aa)
PC1_1058PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eca:ECA1158 putative multidrug transporter membraneATP-binding components. (588 aa)
PC1_1057PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eca:ECA1157 transcription regulator AsnC. (153 aa)
PC1_1044TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1144 muropeptide transporter. (495 aa)
PC1_1037PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1138 transporter. (454 aa)
PC1_1025Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (378 aa)
secFProtein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (324 aa)
secDProtein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (604 aa)
PC1_1015PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: eca:ECA1117 peroxidase. (200 aa)
PC1_1010TIGRFAM: phosphate binding protein; KEGG: eca:ECA1112 putative phosphate binding protein. (312 aa)
PC1_0988PFAM: Pectate lyase; KEGG: eca:ECA1094 pectate lyase. (351 aa)
PC1_0841PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: ent:Ent638_2353 major facilitator transporter. (395 aa)
PC1_0813PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA0930 permease. (397 aa)
PC1_0797PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0912 hypothetical protein. (458 aa)
PC1_0676KEGG: eca:ECA0798 hypothetical protein. (543 aa)
PC1_0675KEGG: eca:ECA0797 hypothetical protein. (216 aa)
PC1_0674KEGG: eca:ECA0796 hypothetical protein. (186 aa)
PC1_0592PFAM: Luciferase-like monooxygenase; KEGG: yen:YE0442 hypothetical protein. (335 aa)
PC1_0575PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_2796 non-ribosomal peptide synthetase. (90 aa)
PC1_0569Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (110 aa)
PC1_0461PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0476 putative iron transporter. (420 aa)
PC1_0428PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0448 putative ABC transporter extracellular solute binding protein. (537 aa)
PC1_0427PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0447 ABC transporter permease protein. (319 aa)
PC1_0426PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0446 ABC transporter permease protein. (288 aa)
PC1_0355PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0370 hypothetical protein. (422 aa)
PC1_0283PFAM: Mammalian cell entry related domain protein; KEGG: eca:ECA0297 hypothetical protein. (188 aa)
PC1_0207TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA0225 shikimate transporter. (465 aa)
rpoCDNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1407 aa)
rpoBDNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1342 aa)
secEPreprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. (127 aa)
tufTranslation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (394 aa)
PC1_0138PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4309 sugar efflux transporter. (395 aa)
PC1_0089KEGG: eca:ECA4355 hypothetical protein. (188 aa)
PC1_0088PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4358 hypothetical protein. (399 aa)
PC1_0065TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: protein of unknown function DUF637 hemagglutinin putative; filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: plu:plu3064 hypothetical protein. (1723 aa)
PC1_0046PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4392 dipeptide transporter. (300 aa)
PC1_0045PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4393 dipeptide transporter permease DppB. (339 aa)
PC1_0044PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4394 periplasmic dipeptide transport protein. (535 aa)
PC1_0027PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_2482 major facilitator transporter. (481 aa)
ssuDAlkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (380 aa)
PC1_0020PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4421 ABC transporter permease protein. (302 aa)
PC1_0019PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4422 ABC transporter permease protein. (325 aa)
PC1_0015PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4426 putative extracellular solute-binding protein. (516 aa)
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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