STRINGSTRING
KKW90563.1 KKW90563.1 KKW90565.1 KKW90565.1 KKW90567.1 KKW90567.1 KKW90568.1 KKW90568.1 KKW90571.1 KKW90571.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KKW90563.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
KKW90565.1Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
KKW90567.1Conjugal transfer protein TraW; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
KKW90568.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)
KKW90571.1(4Fe-4S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (863 aa)
Your Current Organism:
Sphingobium chungbukense
NCBI taxonomy Id: 56193
Other names: IMSNU 11152, JCM 11454, KCTC 2955, Pseudomonas sp. DJ77, S. chungbukense, Sphingobium chungbukense (Kim et al. 2000) Pal et al. 2005, Sphingomonas chungbukensis, Sphingomonas chungbukensis Kim et al. 2000, Sphingomonas sp. DJ77, strain DJ77
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