(20 nodes) Mixed, incl. Ras subfamily of RAS small GTPases, and Positive regulation of neutrophil apoptotic process network (Neotoma lepida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A6R68_08395	Uncharacterized protein. (232 aa)
	A6R68_06865	Uncharacterized protein. (181 aa)
	A6R68_05572	Uncharacterized protein. (68 aa)
	A6R68_05082	Uncharacterized protein. (258 aa)
	A6R68_02895	Rho-GAP domain-containing protein. (570 aa)
	A6R68_02997	Uncharacterized protein. (227 aa)
	A6R68_00467	Uncharacterized protein. (192 aa)
	A6R68_13245	Uncharacterized protein. (577 aa)
	A6R68_14990	Uncharacterized protein. (154 aa)
	A6R68_13996	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1012 aa)
	A6R68_17754	Uncharacterized protein. (733 aa)
	A6R68_17988	Uncharacterized protein. (151 aa)
	A6R68_17359	Uncharacterized protein. (219 aa)
	A6R68_16665	DH domain-containing protein. (611 aa)
	A6R68_19339	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (229 aa)
	A6R68_19337	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (410 aa)
	A6R68_21476	Uncharacterized protein. (136 aa)
	A6R68_21397	Phosphoinositide phospholipase C. (1651 aa)
	A6R68_20170	Uncharacterized protein. (739 aa)
	A6R68_20184	Uncharacterized protein. (988 aa)

Your Current Organism:

Neotoma lepida

NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A6R68_00467	A6R68_02895	A0A1A6GZE8	A0A1A6GQH8	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.927
A6R68_00467	A6R68_02997	A0A1A6GZE8	A0A1A6GRF5	Uncharacterized protein.	Uncharacterized protein.	0.927
A6R68_00467	A6R68_05082	A0A1A6GZE8	A0A1A6GJJ5	Uncharacterized protein.	Uncharacterized protein.	0.812
A6R68_00467	A6R68_05572	A0A1A6GZE8	A0A1A6GHY6	Uncharacterized protein.	Uncharacterized protein.	0.805
A6R68_00467	A6R68_06865	A0A1A6GZE8	A0A1A6GEC7	Uncharacterized protein.	Uncharacterized protein.	0.804
A6R68_00467	A6R68_08395	A0A1A6GZE8	A0A1A6G2Q8	Uncharacterized protein.	Uncharacterized protein.	0.924
A6R68_00467	A6R68_13245	A0A1A6GZE8	A0A1A6H1B9	Uncharacterized protein.	Uncharacterized protein.	0.809
A6R68_00467	A6R68_13996	A0A1A6GZE8	A0A1A6HB04	Uncharacterized protein.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.941
A6R68_00467	A6R68_14990	A0A1A6GZE8	A0A1A6H831	Uncharacterized protein.	Uncharacterized protein.	0.850
A6R68_00467	A6R68_16665	A0A1A6GZE8	A0A1A6HG12	Uncharacterized protein.	DH domain-containing protein.	0.981
A6R68_00467	A6R68_17359	A0A1A6GZE8	A0A1A6HD39	Uncharacterized protein.	Uncharacterized protein.	0.812
A6R68_00467	A6R68_17754	A0A1A6GZE8	A0A1A6HBY3	Uncharacterized protein.	Uncharacterized protein.	0.519
A6R68_00467	A6R68_17988	A0A1A6GZE8	A0A1A6HCC1	Uncharacterized protein.	Uncharacterized protein.	0.836
A6R68_00467	A6R68_19337	A0A1A6GZE8	A0A1A6HJ79	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.938
A6R68_00467	A6R68_19339	A0A1A6GZE8	A0A1A6HJ32	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.938
A6R68_00467	A6R68_20170	A0A1A6GZE8	A0A1A6HT42	Uncharacterized protein.	Uncharacterized protein.	0.946
A6R68_00467	A6R68_20184	A0A1A6GZE8	A0A1A6HV67	Uncharacterized protein.	Uncharacterized protein.	0.921
A6R68_00467	A6R68_21397	A0A1A6GZE8	A0A1A6HQ68	Uncharacterized protein.	Phosphoinositide phospholipase C.	0.794
A6R68_00467	A6R68_21476	A0A1A6GZE8	A0A1A6HQ09	Uncharacterized protein.	Uncharacterized protein.	0.862
A6R68_02895	A6R68_00467	A0A1A6GQH8	A0A1A6GZE8	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.927