31 items (Neotoma lepida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A6R68_11485	Uncharacterized protein. (2274 aa)
	A6R68_11430	Uncharacterized protein. (120 aa)
	A6R68_10139	Peptidase_S8 domain-containing protein. (1031 aa)
	A6R68_09248	CS domain-containing protein. (157 aa)
	A6R68_07336	Cul7 domain-containing protein. (307 aa)
	A6R68_07337	HECT domain-containing protein. (753 aa)
	A6R68_04027	Uncharacterized protein. (112 aa)
	A6R68_01985	Uncharacterized protein. (380 aa)
	A6R68_01664	Ferritin-like diiron domain-containing protein. (151 aa)
	A6R68_01106	Uncharacterized protein. (1313 aa)
	A6R68_00915	BTB domain-containing protein. (479 aa)
	A6R68_12383	HECT domain-containing protein. (523 aa)
	A6R68_15914	AZUL domain-containing protein. (465 aa)
	A6R68_12363	Uncharacterized protein. (347 aa)
	A6R68_12197	Sulfotransferase; Belongs to the sulfotransferase 1 family. (600 aa)
	A6R68_15242	Uncharacterized protein. (101 aa)
	A6R68_15419	HECT domain-containing protein. (530 aa)
	A6R68_15420	HECT domain-containing protein. (238 aa)
	A6R68_16900	Uncharacterized protein. (1658 aa)
	A6R68_16608	Uncharacterized protein. (158 aa)
	A6R68_19827	Uncharacterized protein. (1158 aa)
	A6R68_19080	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (314 aa)
	A6R68_18644	Uncharacterized protein. (440 aa)
	A6R68_18552	Uncharacterized protein. (2970 aa)
	A6R68_18327	Uncharacterized protein. (119 aa)
	A6R68_18551	Uncharacterized protein. (196 aa)
	A6R68_18638	HECT domain-containing protein. (320 aa)
	A6R68_21075	MAGUK_N_PEST domain-containing protein. (109 aa)
	A6R68_23815	BTB domain-containing protein. (768 aa)
	A6R68_23869	Nudc_N domain-containing protein. (171 aa)
	A6R68_22995	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (218 aa)

Your Current Organism:

Neotoma lepida

NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A6R68_00915	A6R68_01664	A0A1A6GYW3	A0A1A6GUE7	BTB domain-containing protein.	Ferritin-like diiron domain-containing protein.	0.562
A6R68_00915	A6R68_04027	A0A1A6GYW3	A0A1A6GPZ4	BTB domain-containing protein.	Uncharacterized protein.	0.578
A6R68_00915	A6R68_09248	A0A1A6GYW3	A0A1A6G1E9	BTB domain-containing protein.	CS domain-containing protein.	0.767
A6R68_00915	A6R68_10139	A0A1A6GYW3	A0A1A6FYR5	BTB domain-containing protein.	Peptidase_S8 domain-containing protein.	0.804
A6R68_00915	A6R68_11430	A0A1A6GYW3	A0A1A6FW88	BTB domain-containing protein.	Uncharacterized protein.	0.767
A6R68_00915	A6R68_12363	A0A1A6GYW3	A0A1A6H5F1	BTB domain-containing protein.	Uncharacterized protein.	0.595
A6R68_00915	A6R68_12383	A0A1A6GYW3	A0A1A6H3Z4	BTB domain-containing protein.	HECT domain-containing protein.	0.669
A6R68_00915	A6R68_15419	A0A1A6GYW3	A0A1A6H6V1	BTB domain-containing protein.	HECT domain-containing protein.	0.668
A6R68_00915	A6R68_15420	A0A1A6GYW3	A0A1A6H8V8	BTB domain-containing protein.	HECT domain-containing protein.	0.668
A6R68_00915	A6R68_15914	A0A1A6GYW3	A0A1A6H4M9	BTB domain-containing protein.	AZUL domain-containing protein.	0.663
A6R68_00915	A6R68_16608	A0A1A6GYW3	A0A1A6HFD2	BTB domain-containing protein.	Uncharacterized protein.	0.581
A6R68_00915	A6R68_18327	A0A1A6GYW3	A0A1A6HM06	BTB domain-containing protein.	Uncharacterized protein.	0.566
A6R68_00915	A6R68_18638	A0A1A6GYW3	A0A1A6HML4	BTB domain-containing protein.	HECT domain-containing protein.	0.671
A6R68_00915	A6R68_18644	A0A1A6GYW3	A0A1A6HKB1	BTB domain-containing protein.	Uncharacterized protein.	0.671
A6R68_00915	A6R68_19080	A0A1A6GYW3	A0A1A6HJX8	BTB domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.578
A6R68_00915	A6R68_22995	A0A1A6GYW3	A0A1A6HXR1	BTB domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.578
A6R68_00915	A6R68_23815	A0A1A6GYW3	A0A1A6HVD2	BTB domain-containing protein.	BTB domain-containing protein.	0.664
A6R68_00915	A6R68_23869	A0A1A6GYW3	A0A1A6HWN2	BTB domain-containing protein.	Nudc_N domain-containing protein.	0.537
A6R68_01106	A6R68_07336	A0A1A6GYG0	A0A1A6GE42	Uncharacterized protein.	Cul7 domain-containing protein.	0.771
A6R68_01106	A6R68_07337	A0A1A6GYG0	A0A1A6GED7	Uncharacterized protein.	HECT domain-containing protein.	0.771