6 items (Neotoma lepida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A6R68_11430	Uncharacterized protein. (120 aa)
	A6R68_09248	CS domain-containing protein. (157 aa)
	A6R68_00915	BTB domain-containing protein. (479 aa)
	A6R68_19827	Uncharacterized protein. (1158 aa)
	A6R68_23815	BTB domain-containing protein. (768 aa)
	A6R68_23869	Nudc_N domain-containing protein. (171 aa)

Your Current Organism:

Neotoma lepida

NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A6R68_00915	A6R68_09248	A0A1A6GYW3	A0A1A6G1E9	BTB domain-containing protein.	CS domain-containing protein.	0.767
A6R68_00915	A6R68_11430	A0A1A6GYW3	A0A1A6FW88	BTB domain-containing protein.	Uncharacterized protein.	0.767
A6R68_00915	A6R68_23815	A0A1A6GYW3	A0A1A6HVD2	BTB domain-containing protein.	BTB domain-containing protein.	0.664
A6R68_00915	A6R68_23869	A0A1A6GYW3	A0A1A6HWN2	BTB domain-containing protein.	Nudc_N domain-containing protein.	0.537
A6R68_09248	A6R68_00915	A0A1A6G1E9	A0A1A6GYW3	CS domain-containing protein.	BTB domain-containing protein.	0.767
A6R68_09248	A6R68_19827	A0A1A6G1E9	A0A1A6HIJ5	CS domain-containing protein.	Uncharacterized protein.	0.656
A6R68_09248	A6R68_23815	A0A1A6G1E9	A0A1A6HVD2	CS domain-containing protein.	BTB domain-containing protein.	0.768
A6R68_11430	A6R68_00915	A0A1A6FW88	A0A1A6GYW3	Uncharacterized protein.	BTB domain-containing protein.	0.767
A6R68_11430	A6R68_19827	A0A1A6FW88	A0A1A6HIJ5	Uncharacterized protein.	Uncharacterized protein.	0.656
A6R68_11430	A6R68_23815	A0A1A6FW88	A0A1A6HVD2	Uncharacterized protein.	BTB domain-containing protein.	0.768
A6R68_19827	A6R68_09248	A0A1A6HIJ5	A0A1A6G1E9	Uncharacterized protein.	CS domain-containing protein.	0.656
A6R68_19827	A6R68_11430	A0A1A6HIJ5	A0A1A6FW88	Uncharacterized protein.	Uncharacterized protein.	0.656
A6R68_19827	A6R68_23869	A0A1A6HIJ5	A0A1A6HWN2	Uncharacterized protein.	Nudc_N domain-containing protein.	0.656
A6R68_23815	A6R68_00915	A0A1A6HVD2	A0A1A6GYW3	BTB domain-containing protein.	BTB domain-containing protein.	0.664
A6R68_23815	A6R68_09248	A0A1A6HVD2	A0A1A6G1E9	BTB domain-containing protein.	CS domain-containing protein.	0.768
A6R68_23815	A6R68_11430	A0A1A6HVD2	A0A1A6FW88	BTB domain-containing protein.	Uncharacterized protein.	0.768
A6R68_23815	A6R68_23869	A0A1A6HVD2	A0A1A6HWN2	BTB domain-containing protein.	Nudc_N domain-containing protein.	0.537
A6R68_23869	A6R68_00915	A0A1A6HWN2	A0A1A6GYW3	Nudc_N domain-containing protein.	BTB domain-containing protein.	0.537
A6R68_23869	A6R68_19827	A0A1A6HWN2	A0A1A6HIJ5	Nudc_N domain-containing protein.	Uncharacterized protein.	0.656
A6R68_23869	A6R68_23815	A0A1A6HWN2	A0A1A6HVD2	Nudc_N domain-containing protein.	BTB domain-containing protein.	0.537