40 items (Neotoma lepida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A6R68_23733	PH domain-containing protein. (168 aa)
	A6R68_23460	Uncharacterized protein; Belongs to the synaptobrevin family. (250 aa)
	A6R68_14265	Uncharacterized protein; Belongs to the peptidase S1 family. (1255 aa)
	A6R68_14283	MAP2_projctn domain-containing protein. (1009 aa)
	A6R68_14267	Uncharacterized protein. (648 aa)
	A6R68_12138	Uncharacterized protein; Belongs to the MAGUK family. (346 aa)
	A6R68_12385	Uncharacterized protein. (379 aa)
	A6R68_13655	Uncharacterized protein. (273 aa)
	A6R68_00305	Uncharacterized protein. (112 aa)
	A6R68_01974	NHR domain-containing protein. (250 aa)
	A6R68_01914	Uncharacterized protein. (378 aa)
	A6R68_02089	Cyclic nucleotide-binding domain-containing protein. (54 aa)
	A6R68_02191	Uncharacterized protein. (80 aa)
	A6R68_02476	Uncharacterized protein. (237 aa)
	A6R68_03287	Uncharacterized protein. (190 aa)
	A6R68_04072	Uncharacterized protein. (962 aa)
	A6R68_04452	PDZ domain-containing protein. (241 aa)
	A6R68_03966	MAP2_projctn domain-containing protein. (287 aa)
	A6R68_04453	PDZ domain-containing protein. (101 aa)
	A6R68_04455	Uncharacterized protein. (348 aa)
	A6R68_05611	Cyclic nucleotide-binding domain-containing protein. (100 aa)
	A6R68_07276	Amino acid transporter. (382 aa)
	A6R68_07507	Ion_trans_N domain-containing protein. (171 aa)
	A6R68_09166	Uncharacterized protein. (2193 aa)
	A6R68_09306	PBPe domain-containing protein. (813 aa)
	A6R68_09945	Uncharacterized protein. (128 aa)
	A6R68_09812	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (321 aa)
	A6R68_10667	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (295 aa)
	A6R68_11370	Uncharacterized protein. (594 aa)
	A6R68_10671	Uncharacterized protein. (656 aa)
	A6R68_16856	MFS domain-containing protein. (277 aa)
	A6R68_11368	Uncharacterized protein. (405 aa)
	A6R68_16364	Uncharacterized protein. (559 aa)
	A6R68_22019	Uncharacterized protein. (190 aa)
	A6R68_21406	Uncharacterized protein. (2536 aa)
	A6R68_21155	Uncharacterized protein. (339 aa)
	A6R68_21153	Uncharacterized protein. (829 aa)
	A6R68_21158	PH domain-containing protein. (126 aa)
	A6R68_23921	ANF_receptor domain-containing protein. (195 aa)
	A6R68_23732	Oxysterol-binding protein; Belongs to the OSBP family. (551 aa)

Your Current Organism:

Neotoma lepida

NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A6R68_00305	A6R68_03966	A0A1A6GYU4	A0A1A6GMI1	Uncharacterized protein.	MAP2_projctn domain-containing protein.	0.807
A6R68_00305	A6R68_09166	A0A1A6GYU4	A0A1A6G2V1	Uncharacterized protein.	Uncharacterized protein.	0.666
A6R68_00305	A6R68_12138	A0A1A6GYU4	A0A1A6H4P2	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.702
A6R68_00305	A6R68_14283	A0A1A6GYU4	A0A1A6HA54	Uncharacterized protein.	MAP2_projctn domain-containing protein.	0.894
A6R68_01914	A6R68_01974	A0A1A6GVV8	A0A1A6GW11	Uncharacterized protein.	NHR domain-containing protein.	0.930
A6R68_01914	A6R68_12138	A0A1A6GVV8	A0A1A6H4P2	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.632
A6R68_01974	A6R68_01914	A0A1A6GW11	A0A1A6GVV8	NHR domain-containing protein.	Uncharacterized protein.	0.930
A6R68_01974	A6R68_12138	A0A1A6GW11	A0A1A6H4P2	NHR domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.632
A6R68_02476	A6R68_22019	A0A1A6GRL5	A0A1A6HP60	Uncharacterized protein.	Uncharacterized protein.	0.927
A6R68_03287	A6R68_11368	A0A1A6GPP8	A0A1A6FVB7	Uncharacterized protein.	Uncharacterized protein.	0.965
A6R68_03287	A6R68_11370	A0A1A6GPP8	A0A1A6FWD5	Uncharacterized protein.	Uncharacterized protein.	0.965
A6R68_03287	A6R68_12138	A0A1A6GPP8	A0A1A6H4P2	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.568
A6R68_03287	A6R68_21153	A0A1A6GPP8	A0A1A6HSE5	Uncharacterized protein.	Uncharacterized protein.	0.604
A6R68_03287	A6R68_21155	A0A1A6GPP8	A0A1A6HQY5	Uncharacterized protein.	Uncharacterized protein.	0.604
A6R68_03287	A6R68_21158	A0A1A6GPP8	A0A1A6HSE9	Uncharacterized protein.	PH domain-containing protein.	0.604
A6R68_03966	A6R68_00305	A0A1A6GMI1	A0A1A6GYU4	MAP2_projctn domain-containing protein.	Uncharacterized protein.	0.807
A6R68_03966	A6R68_09166	A0A1A6GMI1	A0A1A6G2V1	MAP2_projctn domain-containing protein.	Uncharacterized protein.	0.666
A6R68_03966	A6R68_12138	A0A1A6GMI1	A0A1A6H4P2	MAP2_projctn domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.702
A6R68_03966	A6R68_14283	A0A1A6GMI1	A0A1A6HA54	MAP2_projctn domain-containing protein.	MAP2_projctn domain-containing protein.	0.906
A6R68_04072	A6R68_09945	A0A1A6GNT6	A0A1A6FZD5	Uncharacterized protein.	Uncharacterized protein.	0.590