18 items (Neotoma lepida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A6R68_09046	F-box domain-containing protein. (590 aa)
	A6R68_18552	Uncharacterized protein. (2970 aa)
	A6R68_21856	HECT domain-containing protein. (648 aa)
	A6R68_23815	BTB domain-containing protein. (768 aa)
	A6R68_16059	Protein kinase domain-containing protein. (745 aa)
	A6R68_18644	Uncharacterized protein. (440 aa)
	A6R68_19679	Uncharacterized protein. (155 aa)
	A6R68_11485	Uncharacterized protein. (2274 aa)
	A6R68_10007	Uncharacterized protein. (440 aa)
	A6R68_08168	Uncharacterized protein. (369 aa)
	A6R68_07337	HECT domain-containing protein. (753 aa)
	A6R68_05842	Uncharacterized protein. (1035 aa)
	A6R68_03789	Uncharacterized protein. (463 aa)
	A6R68_04091	Protein kinase domain-containing protein. (732 aa)
	A6R68_01676	Uncharacterized protein. (140 aa)
	A6R68_01985	Uncharacterized protein. (380 aa)
	A6R68_00915	BTB domain-containing protein. (479 aa)
	A6R68_12712	Uncharacterized protein. (1511 aa)

Your Current Organism:

Neotoma lepida

NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A6R68_00915	A6R68_18644	A0A1A6GYW3	A0A1A6HKB1	BTB domain-containing protein.	Uncharacterized protein.	0.671
A6R68_00915	A6R68_21856	A0A1A6GYW3	A0A1A6HQE4	BTB domain-containing protein.	HECT domain-containing protein.	0.668
A6R68_00915	A6R68_23815	A0A1A6GYW3	A0A1A6HVD2	BTB domain-containing protein.	BTB domain-containing protein.	0.664
A6R68_01676	A6R68_18644	A0A1A6GTX9	A0A1A6HKB1	Uncharacterized protein.	Uncharacterized protein.	0.663
A6R68_01676	A6R68_21856	A0A1A6GTX9	A0A1A6HQE4	Uncharacterized protein.	HECT domain-containing protein.	0.663
A6R68_01985	A6R68_18644	A0A1A6GU49	A0A1A6HKB1	Uncharacterized protein.	Uncharacterized protein.	0.700
A6R68_01985	A6R68_21856	A0A1A6GU49	A0A1A6HQE4	Uncharacterized protein.	HECT domain-containing protein.	0.700
A6R68_03789	A6R68_10007	A0A1A6GMV8	A0A1A6FYA9	Uncharacterized protein.	Uncharacterized protein.	0.433
A6R68_03789	A6R68_18644	A0A1A6GMV8	A0A1A6HKB1	Uncharacterized protein.	Uncharacterized protein.	0.663
A6R68_03789	A6R68_21856	A0A1A6GMV8	A0A1A6HQE4	Uncharacterized protein.	HECT domain-containing protein.	0.663
A6R68_04091	A6R68_12712	A0A1A6GNF9	A0A1A6H293	Protein kinase domain-containing protein.	Uncharacterized protein.	0.619
A6R68_05842	A6R68_18644	A0A1A6GH73	A0A1A6HKB1	Uncharacterized protein.	Uncharacterized protein.	0.719
A6R68_05842	A6R68_21856	A0A1A6GH73	A0A1A6HQE4	Uncharacterized protein.	HECT domain-containing protein.	0.719
A6R68_07337	A6R68_18552	A0A1A6GED7	A0A1A6HL93	HECT domain-containing protein.	Uncharacterized protein.	0.513
A6R68_07337	A6R68_18644	A0A1A6GED7	A0A1A6HKB1	HECT domain-containing protein.	Uncharacterized protein.	0.799
A6R68_07337	A6R68_21856	A0A1A6GED7	A0A1A6HQE4	HECT domain-containing protein.	HECT domain-containing protein.	0.799
A6R68_08168	A6R68_18644	A0A1A6G5U0	A0A1A6HKB1	Uncharacterized protein.	Uncharacterized protein.	0.721
A6R68_08168	A6R68_21856	A0A1A6G5U0	A0A1A6HQE4	Uncharacterized protein.	HECT domain-containing protein.	0.721
A6R68_10007	A6R68_03789	A0A1A6FYA9	A0A1A6GMV8	Uncharacterized protein.	Uncharacterized protein.	0.433
A6R68_10007	A6R68_18644	A0A1A6FYA9	A0A1A6HKB1	Uncharacterized protein.	Uncharacterized protein.	0.703