(14 nodes) Potassium channel, inwardly rectifying, transmembrane domain network (Neotoma lepida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A6R68_02065	Uncharacterized protein. (444 aa)
	A6R68_10721	Uncharacterized protein. (405 aa)
	A6R68_08491	Uncharacterized protein. (433 aa)
	A6R68_04587	Uncharacterized protein. (392 aa)
	A6R68_04593	Uncharacterized protein. (392 aa)
	A6R68_03689	Uncharacterized protein. (356 aa)
	A6R68_13099	Uncharacterized protein. (530 aa)
	A6R68_20016	Uncharacterized protein. (306 aa)
	A6R68_19981	Uncharacterized protein. (401 aa)
	A6R68_21293	Uncharacterized protein. (309 aa)
	A6R68_20362	Uncharacterized protein. (379 aa)
	A6R68_23889	Uncharacterized protein. (398 aa)
	A6R68_23417	Uncharacterized protein. (360 aa)
	A6R68_23359	Uncharacterized protein. (390 aa)

Your Current Organism:

Neotoma lepida

NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A6R68_02065	A6R68_03689	A0A1A6GVS7	A0A1A6GPZ7	Uncharacterized protein.	Uncharacterized protein.	0.857
A6R68_02065	A6R68_04587	A0A1A6GVS7	A0A1A6GKR4	Uncharacterized protein.	Uncharacterized protein.	0.607
A6R68_02065	A6R68_04593	A0A1A6GVS7	A0A1A6GLY0	Uncharacterized protein.	Uncharacterized protein.	0.706
A6R68_02065	A6R68_08491	A0A1A6GVS7	A0A1A6G3C7	Uncharacterized protein.	Uncharacterized protein.	0.828
A6R68_02065	A6R68_10721	A0A1A6GVS7	A0A1A6FX69	Uncharacterized protein.	Uncharacterized protein.	0.711
A6R68_02065	A6R68_13099	A0A1A6GVS7	A0A1A6H210	Uncharacterized protein.	Uncharacterized protein.	0.878
A6R68_02065	A6R68_19981	A0A1A6GVS7	A0A1A6HI37	Uncharacterized protein.	Uncharacterized protein.	0.647
A6R68_02065	A6R68_20016	A0A1A6GVS7	A0A1A6HI03	Uncharacterized protein.	Uncharacterized protein.	0.637
A6R68_02065	A6R68_21293	A0A1A6GVS7	A0A1A6HQH3	Uncharacterized protein.	Uncharacterized protein.	0.574
A6R68_02065	A6R68_23889	A0A1A6GVS7	A0A1A6HV54	Uncharacterized protein.	Uncharacterized protein.	0.645
A6R68_03689	A6R68_02065	A0A1A6GPZ7	A0A1A6GVS7	Uncharacterized protein.	Uncharacterized protein.	0.857
A6R68_03689	A6R68_04587	A0A1A6GPZ7	A0A1A6GKR4	Uncharacterized protein.	Uncharacterized protein.	0.616
A6R68_03689	A6R68_04593	A0A1A6GPZ7	A0A1A6GLY0	Uncharacterized protein.	Uncharacterized protein.	0.652
A6R68_03689	A6R68_08491	A0A1A6GPZ7	A0A1A6G3C7	Uncharacterized protein.	Uncharacterized protein.	0.827
A6R68_03689	A6R68_10721	A0A1A6GPZ7	A0A1A6FX69	Uncharacterized protein.	Uncharacterized protein.	0.656
A6R68_03689	A6R68_13099	A0A1A6GPZ7	A0A1A6H210	Uncharacterized protein.	Uncharacterized protein.	0.872
A6R68_03689	A6R68_19981	A0A1A6GPZ7	A0A1A6HI37	Uncharacterized protein.	Uncharacterized protein.	0.628
A6R68_03689	A6R68_20016	A0A1A6GPZ7	A0A1A6HI03	Uncharacterized protein.	Uncharacterized protein.	0.640
A6R68_03689	A6R68_21293	A0A1A6GPZ7	A0A1A6HQH3	Uncharacterized protein.	Uncharacterized protein.	0.636
A6R68_03689	A6R68_23889	A0A1A6GPZ7	A0A1A6HV54	Uncharacterized protein.	Uncharacterized protein.	0.675