STRINGSTRING
A6R68_07555 A6R68_07555 A6R68_08297 A6R68_08297 A6R68_08145 A6R68_08145 A6R68_08275 A6R68_08275 A6R68_08274 A6R68_08274 A6R68_08542 A6R68_08542 A6R68_08301 A6R68_08301 A6R68_09589 A6R68_09589 A6R68_09598 A6R68_09598 A6R68_10511 A6R68_10511 A6R68_10379 A6R68_10379 A6R68_10787 A6R68_10787 A6R68_11331 A6R68_11331 A6R68_11326 A6R68_11326 A6R68_11120 A6R68_11120 A6R68_10808 A6R68_10808 A6R68_11328 A6R68_11328 A6R68_11485 A6R68_11485 A6R68_11332 A6R68_11332 A6R68_22262 A6R68_22262 A6R68_22756 A6R68_22756 A6R68_23145 A6R68_23145 A6R68_23894 A6R68_23894 A6R68_23458 A6R68_23458 A6R68_24147 A6R68_24147 A6R68_23893 A6R68_23893 A6R68_23973 A6R68_23973 A6R68_21112 A6R68_21112 A6R68_20830 A6R68_20830 A6R68_21116 A6R68_21116 A6R68_21859 A6R68_21859 A6R68_18490 A6R68_18490 A6R68_18481 A6R68_18481 A6R68_18538 A6R68_18538 A6R68_18318 A6R68_18318 A6R68_19387 A6R68_19387 A6R68_18849 A6R68_18849 A6R68_18856 A6R68_18856 A6R68_18848 A6R68_18848 A6R68_19440 A6R68_19440 A6R68_16307 A6R68_16307 A6R68_16511 A6R68_16511 A6R68_16501 A6R68_16501 A6R68_17337 A6R68_17337 A6R68_16785 A6R68_16785 A6R68_17338 A6R68_17338 A6R68_14182 A6R68_14182 A6R68_15101 A6R68_15101 A6R68_14869 A6R68_14869 A6R68_15109 A6R68_15109 A6R68_15180 A6R68_15180 A6R68_13117 A6R68_13117 A6R68_00648 A6R68_00648 A6R68_00643 A6R68_00643 A6R68_01967 A6R68_01967 A6R68_02101 A6R68_02101 A6R68_02621 A6R68_02621 A6R68_02780 A6R68_02780 A6R68_03356 A6R68_03356 A6R68_03446 A6R68_03446 A6R68_04536 A6R68_04536 A6R68_04053 A6R68_04053 A6R68_04533 A6R68_04533 A6R68_05045 A6R68_05045 A6R68_05954 A6R68_05954 A6R68_05986 A6R68_05986 A6R68_06252 A6R68_06252 A6R68_06734 A6R68_06734 A6R68_06982 A6R68_06982 A6R68_07337 A6R68_07337 A6R68_07336 A6R68_07336 A6R68_07802 A6R68_07802 A6R68_07675 A6R68_07675
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A6R68_07555Uncharacterized protein. (140 aa)
A6R68_08297Uncharacterized protein. (393 aa)
A6R68_08145FAT domain-containing protein. (125 aa)
A6R68_08275Uncharacterized protein. (88 aa)
A6R68_08274Uncharacterized protein. (541 aa)
A6R68_08542Uncharacterized protein. (498 aa)
A6R68_08301Uncharacterized protein. (135 aa)
A6R68_09589TAN domain-containing protein. (1104 aa)
A6R68_09598DRMBL domain-containing protein. (285 aa)
A6R68_10511Uncharacterized protein. (331 aa)
A6R68_10379Histone H2A; Belongs to the histone H2A family. (143 aa)
A6R68_10787Histone H2B; Belongs to the histone H2B family. (126 aa)
A6R68_11331Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (77 aa)
A6R68_11326Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
A6R68_11120Histone H2B; Belongs to the histone H2B family. (119 aa)
A6R68_10808Histone H2B; Belongs to the histone H2B family. (126 aa)
A6R68_11328Histone H2B; Belongs to the histone H2B family. (358 aa)
A6R68_11485Uncharacterized protein. (2274 aa)
A6R68_11332Uncharacterized protein; Belongs to the histone H2B family. (73 aa)
A6R68_22262RING-type domain-containing protein. (453 aa)
A6R68_22756Uncharacterized protein. (1049 aa)
A6R68_23145Uncharacterized protein. (296 aa)
A6R68_23894DNA_ligase_A_N domain-containing protein. (317 aa)
A6R68_23458DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (493 aa)
A6R68_24147Histone H2B; Belongs to the histone H2B family. (125 aa)
A6R68_23893BRCT domain-containing protein. (315 aa)
A6R68_23973Uncharacterized protein. (2107 aa)
A6R68_21112FAT domain-containing protein. (1837 aa)
A6R68_20830Uncharacterized protein. (449 aa)
A6R68_21116UBIQUITIN_CONJUGAT_2 domain-containing protein. (141 aa)
A6R68_21859FHA domain-containing protein. (496 aa)
A6R68_18490Uncharacterized protein. (483 aa)
A6R68_18481Uncharacterized protein. (92 aa)
A6R68_18538MPN domain-containing protein. (350 aa)
A6R68_18318BRCC36_C domain-containing protein. (173 aa)
A6R68_19387Non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family. (215 aa)
A6R68_18849Uncharacterized protein. (876 aa)
A6R68_18856Uncharacterized protein. (64 aa)
A6R68_1884853-BP1_Tudor domain-containing protein. (645 aa)
A6R68_19440FAT domain-containing protein. (165 aa)
A6R68_16307Uncharacterized protein. (77 aa)
A6R68_16511Histone H2B; Belongs to the histone H2B family. (151 aa)
A6R68_16501Uncharacterized protein. (244 aa)
A6R68_17337BRCT domain-containing protein. (120 aa)
A6R68_16785Histone domain-containing protein; Belongs to the histone H2B family. (204 aa)
A6R68_17338ANK_REP_REGION domain-containing protein. (415 aa)
A6R68_14182Uncharacterized protein. (354 aa)
A6R68_15101Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A6R68_14869Uncharacterized protein. (1749 aa)
A6R68_15109Histone H2B; Belongs to the histone H2B family. (126 aa)
A6R68_15180Uncharacterized protein. (157 aa)
A6R68_13117DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (443 aa)
A6R68_00648Uncharacterized protein. (712 aa)
A6R68_00643Uncharacterized protein. (633 aa)
A6R68_01967DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (573 aa)
A6R68_02101Histone domain-containing protein; Belongs to the histone H2B family. (152 aa)
A6R68_02621SAP domain-containing protein. (429 aa)
A6R68_02780Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (418 aa)
A6R68_03356Uncharacterized protein. (91 aa)
A6R68_03446Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (156 aa)
A6R68_04536BRCT_assoc domain-containing protein. (1265 aa)
A6R68_04053Uncharacterized protein. (268 aa)
A6R68_04533BRCT domain-containing protein. (98 aa)
A6R68_05045Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (125 aa)
A6R68_05954UBIQUITIN_CONJUGAT_2 domain-containing protein. (176 aa)
A6R68_05986RAP80_UIM domain-containing protein. (409 aa)
A6R68_06252Zinc-hook domain-containing protein. (920 aa)
A6R68_06734Uncharacterized protein. (322 aa)
A6R68_06982zf-RING_6 domain-containing protein. (167 aa)
A6R68_07337HECT domain-containing protein. (753 aa)
A6R68_07336Cul7 domain-containing protein. (307 aa)
A6R68_07802Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (96 aa)
A6R68_07675DNA_ligase_A_N domain-containing protein. (140 aa)
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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