STRINGSTRING
A6R68_11332 A6R68_11332 A6R68_11485 A6R68_11485 A6R68_11328 A6R68_11328 A6R68_10808 A6R68_10808 A6R68_11120 A6R68_11120 A6R68_11326 A6R68_11326 A6R68_11331 A6R68_11331 A6R68_10885 A6R68_10885 A6R68_10787 A6R68_10787 A6R68_11102 A6R68_11102 A6R68_10640 A6R68_10640 A6R68_10035 A6R68_10035 A6R68_10379 A6R68_10379 A6R68_09992 A6R68_09992 A6R68_10511 A6R68_10511 A6R68_09622 A6R68_09622 A6R68_09751 A6R68_09751 A6R68_09589 A6R68_09589 A6R68_08159 A6R68_08159 A6R68_08157 A6R68_08157 A6R68_08542 A6R68_08542 A6R68_08457 A6R68_08457 A6R68_07530 A6R68_07530 A6R68_07825 A6R68_07825 A6R68_07802 A6R68_07802 A6R68_07336 A6R68_07336 A6R68_06893 A6R68_06893 A6R68_07337 A6R68_07337 A6R68_06982 A6R68_06982 A6R68_06348 A6R68_06348 A6R68_06252 A6R68_06252 A6R68_05986 A6R68_05986 A6R68_05954 A6R68_05954 A6R68_04761 A6R68_04761 A6R68_04766 A6R68_04766 A6R68_05099 A6R68_05099 A6R68_05045 A6R68_05045 A6R68_04533 A6R68_04533 A6R68_04835 A6R68_04835 A6R68_04272 A6R68_04272 A6R68_04536 A6R68_04536 A6R68_03446 A6R68_03446 A6R68_03356 A6R68_03356 A6R68_03340 A6R68_03340 A6R68_03323 A6R68_03323 A6R68_02857 A6R68_02857 A6R68_02780 A6R68_02780 A6R68_03324 A6R68_03324 A6R68_02913 A6R68_02913 A6R68_02101 A6R68_02101 A6R68_02856 A6R68_02856 A6R68_01992 A6R68_01992 A6R68_02681 A6R68_02681 A6R68_02663 A6R68_02663 A6R68_02565 A6R68_02565 A6R68_01078 A6R68_01078 A6R68_00643 A6R68_00643 A6R68_00648 A6R68_00648 A6R68_01622 A6R68_01622 A6R68_13410 A6R68_13410 A6R68_00183 A6R68_00183 A6R68_13386 A6R68_13386 A6R68_13159 A6R68_13159 A6R68_13318 A6R68_13318 A6R68_12545 A6R68_12545 A6R68_15180 A6R68_15180 A6R68_15109 A6R68_15109 A6R68_14869 A6R68_14869 A6R68_14702 A6R68_14702 A6R68_15101 A6R68_15101 A6R68_17762 A6R68_17762 A6R68_17338 A6R68_17338 A6R68_16785 A6R68_16785 A6R68_17337 A6R68_17337 A6R68_16819 A6R68_16819 A6R68_16511 A6R68_16511 A6R68_16307 A6R68_16307 A6R68_16542 A6R68_16542 A6R68_19837 A6R68_19837 A6R68_18848 A6R68_18848 A6R68_19248 A6R68_19248 A6R68_18856 A6R68_18856 A6R68_18849 A6R68_18849 A6R68_19387 A6R68_19387 A6R68_18318 A6R68_18318 A6R68_18538 A6R68_18538 A6R68_18648 A6R68_18648 A6R68_22182 A6R68_22182 A6R68_21859 A6R68_21859 A6R68_21116 A6R68_21116 A6R68_20830 A6R68_20830 A6R68_20339 A6R68_20339 A6R68_20870 A6R68_20870 A6R68_20853 A6R68_20853 A6R68_20472 A6R68_20472 A6R68_24147 A6R68_24147 A6R68_23145 A6R68_23145 A6R68_22420 A6R68_22420 A6R68_22423 A6R68_22423 A6R68_22262 A6R68_22262
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A6R68_11332Uncharacterized protein; Belongs to the histone H2B family. (73 aa)
A6R68_11485Uncharacterized protein. (2274 aa)
A6R68_11328Histone H2B; Belongs to the histone H2B family. (358 aa)
A6R68_10808Histone H2B; Belongs to the histone H2B family. (126 aa)
A6R68_11120Histone H2B; Belongs to the histone H2B family. (119 aa)
A6R68_11326Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
A6R68_11331Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (77 aa)
A6R68_10885Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (655 aa)
A6R68_10787Histone H2B; Belongs to the histone H2B family. (126 aa)
A6R68_11102DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (820 aa)
A6R68_10640RPA_C domain-containing protein. (315 aa)
A6R68_10035Uncharacterized protein. (358 aa)
A6R68_10379Histone H2A; Belongs to the histone H2A family. (143 aa)
A6R68_09992RPA_C domain-containing protein. (174 aa)
A6R68_10511Uncharacterized protein. (331 aa)
A6R68_09622Uncharacterized protein. (820 aa)
A6R68_097513'-5' exonuclease domain-containing protein. (152 aa)
A6R68_09589TAN domain-containing protein. (1104 aa)
A6R68_08159Helicase C-terminal domain-containing protein. (290 aa)
A6R68_08157Helicase ATP-binding domain-containing protein. (795 aa)
A6R68_08542Uncharacterized protein. (498 aa)
A6R68_08457Uncharacterized protein. (446 aa)
A6R68_07530Uncharacterized protein. (378 aa)
A6R68_0782514_3_3 domain-containing protein; Belongs to the 14-3-3 family. (248 aa)
A6R68_07802Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (96 aa)
A6R68_07336Cul7 domain-containing protein. (307 aa)
A6R68_06893Checkpoint protein; Belongs to the HUS1 family. (280 aa)
A6R68_07337HECT domain-containing protein. (753 aa)
A6R68_06982zf-RING_6 domain-containing protein. (167 aa)
A6R68_063483'-5' exonuclease domain-containing protein. (496 aa)
A6R68_06252Zinc-hook domain-containing protein. (920 aa)
A6R68_05986RAP80_UIM domain-containing protein. (409 aa)
A6R68_05954UBIQUITIN_CONJUGAT_2 domain-containing protein. (176 aa)
A6R68_04761Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (224 aa)
A6R68_04766Uncharacterized protein. (101 aa)
A6R68_05099Uncharacterized protein. (96 aa)
A6R68_05045Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (125 aa)
A6R68_04533BRCT domain-containing protein. (98 aa)
A6R68_04835Uncharacterized protein. (137 aa)
A6R68_04272Uncharacterized protein. (1136 aa)
A6R68_04536BRCT_assoc domain-containing protein. (1265 aa)
A6R68_03446Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (156 aa)
A6R68_03356Uncharacterized protein. (91 aa)
A6R68_03340Uncharacterized protein. (101 aa)
A6R68_03323UME domain-containing protein. (695 aa)
A6R68_02857Protein kinase domain-containing protein. (157 aa)
A6R68_02780Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (418 aa)
A6R68_03324Uncharacterized protein. (469 aa)
A6R68_0291314_3_3 domain-containing protein; Belongs to the 14-3-3 family. (221 aa)
A6R68_02101Histone domain-containing protein; Belongs to the histone H2B family. (152 aa)
A6R68_02856FHA domain-containing protein. (275 aa)
A6R68_01992ATPase_AAA_core domain-containing protein. (116 aa)
A6R68_02681Uncharacterized protein. (1386 aa)
A6R68_0266314_3_3 domain-containing protein. (76 aa)
A6R68_02565Uncharacterized protein. (176 aa)
A6R68_01078Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (275 aa)
A6R68_00643Uncharacterized protein. (633 aa)
A6R68_00648Uncharacterized protein. (712 aa)
A6R68_01622Checkpoint protein; Belongs to the HUS1 family. (250 aa)
A6R68_13410CtIP_N domain-containing protein. (108 aa)
A6R68_00183Uncharacterized protein. (704 aa)
A6R68_1338614_3_3 domain-containing protein; Belongs to the 14-3-3 family. (206 aa)
A6R68_13159zf-4CXXC_R1 domain-containing protein. (426 aa)
A6R68_13318Uncharacterized protein. (808 aa)
A6R68_12545Cell cycle checkpoint control protein; Belongs to the rad9 family. (392 aa)
A6R68_15180Uncharacterized protein. (157 aa)
A6R68_15109Histone H2B; Belongs to the histone H2B family. (126 aa)
A6R68_14869Uncharacterized protein. (1749 aa)
A6R68_14702Protein kinase domain-containing protein. (370 aa)
A6R68_15101Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A6R68_17762Uncharacterized protein. (288 aa)
A6R68_17338ANK_REP_REGION domain-containing protein. (415 aa)
A6R68_16785Histone domain-containing protein; Belongs to the histone H2B family. (204 aa)
A6R68_17337BRCT domain-containing protein. (120 aa)
A6R68_16819Uncharacterized protein. (238 aa)
A6R68_16511Histone H2B; Belongs to the histone H2B family. (151 aa)
A6R68_16307Uncharacterized protein. (77 aa)
A6R68_1654214_3_3 domain-containing protein; Belongs to the 14-3-3 family. (246 aa)
A6R68_19837Uncharacterized protein. (166 aa)
A6R68_1884853-BP1_Tudor domain-containing protein. (645 aa)
A6R68_1924814_3_3 domain-containing protein; Belongs to the 14-3-3 family. (227 aa)
A6R68_18856Uncharacterized protein. (64 aa)
A6R68_18849Uncharacterized protein. (876 aa)
A6R68_19387Non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family. (215 aa)
A6R68_18318BRCC36_C domain-containing protein. (173 aa)
A6R68_18538MPN domain-containing protein. (350 aa)
A6R68_18648Uncharacterized protein. (708 aa)
A6R68_22182Uncharacterized protein. (167 aa)
A6R68_21859FHA domain-containing protein. (496 aa)
A6R68_21116UBIQUITIN_CONJUGAT_2 domain-containing protein. (141 aa)
A6R68_20830Uncharacterized protein. (449 aa)
A6R68_2033914_3_3 domain-containing protein; Belongs to the 14-3-3 family. (134 aa)
A6R68_20870Protein kinase domain-containing protein. (407 aa)
A6R68_20853Rhodanese domain-containing protein. (437 aa)
A6R68_20472AAA domain-containing protein. (346 aa)
A6R68_24147Histone H2B; Belongs to the histone H2B family. (125 aa)
A6R68_23145Uncharacterized protein. (296 aa)
A6R68_22420Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (597 aa)
A6R68_2242314_3_3 domain-containing protein; Belongs to the 14-3-3 family. (171 aa)
A6R68_22262RING-type domain-containing protein. (453 aa)
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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