90 items (Neotoma lepida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A6R68_05736	Rho-GAP domain-containing protein. (49 aa)
	A6R68_06016	Uncharacterized protein. (372 aa)
	A6R68_06193	Uncharacterized protein. (734 aa)
	A6R68_05771	Uncharacterized protein. (1458 aa)
	A6R68_11637	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (403 aa)
	A6R68_11612	Protein kinase domain-containing protein. (390 aa)
	A6R68_11368	Uncharacterized protein. (405 aa)
	A6R68_10793	Uncharacterized protein. (6798 aa)
	A6R68_11179	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (151 aa)
	A6R68_10685	PH domain-containing protein. (206 aa)
	A6R68_11370	Uncharacterized protein. (594 aa)
	A6R68_10792	Uncharacterized protein. (1168 aa)
	A6R68_21759	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (312 aa)
	A6R68_10681	Rho-GAP domain-containing protein. (75 aa)
	A6R68_10289	Uncharacterized protein. (454 aa)
	A6R68_10581	GFO_IDH_MocA domain-containing protein. (385 aa)
	A6R68_09697	Uncharacterized protein. (67 aa)
	A6R68_10403	Uncharacterized protein. (362 aa)
	A6R68_10299	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (296 aa)
	A6R68_09745	Copine domain-containing protein. (97 aa)
	A6R68_08177	Uncharacterized protein. (1367 aa)
	A6R68_08087	Rho-GAP domain-containing protein. (401 aa)
	A6R68_08408	Uncharacterized protein. (417 aa)
	A6R68_08466	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (184 aa)
	A6R68_08314	Uncharacterized protein. (191 aa)
	A6R68_08178	Calponin-homology (CH) domain-containing protein. (158 aa)
	A6R68_07089	Rho-GAP domain-containing protein. (185 aa)
	A6R68_06674	Uncharacterized protein. (1341 aa)
	A6R68_07484	SH3 domain-containing protein. (69 aa)
	A6R68_06471	Uncharacterized protein. (1568 aa)
	A6R68_07088	Uncharacterized protein. (1302 aa)
	A6R68_06777	Uncharacterized protein. (1913 aa)
	A6R68_10683	Uncharacterized protein. (83 aa)
	A6R68_21731	Uncharacterized protein. (166 aa)
	A6R68_18279	Uncharacterized protein. (202 aa)
	A6R68_22079	Rho-GAP domain-containing protein. (102 aa)
	A6R68_18254	Uncharacterized protein. (594 aa)
	A6R68_19038	PDZ domain-containing protein. (366 aa)
	A6R68_19098	Non-specific serine/threonine protein kinase. (575 aa)
	A6R68_19309	Uncharacterized protein. (524 aa)
	A6R68_16900	Uncharacterized protein. (1658 aa)
	A6R68_17344	Rho-GAP domain-containing protein. (340 aa)
	A6R68_17312	Amino acid transporter. (561 aa)
	A6R68_17720	CRIB domain-containing protein. (280 aa)
	A6R68_12002	Guanylate kinase-like domain-containing protein. (63 aa)
	A6R68_14383	Uncharacterized protein. (539 aa)
	A6R68_14488	V-SNARE coiled-coil homology domain-containing protein. (104 aa)
	A6R68_15024	C2 domain-containing protein. (113 aa)
	A6R68_15195	Uncharacterized protein. (143 aa)
	A6R68_15026	Anion exchange protein. (1169 aa)
	A6R68_15025	Uncharacterized protein. (599 aa)
	A6R68_14812	Uncharacterized protein. (161 aa)
	A6R68_15193	ANK_REP_REGION domain-containing protein. (330 aa)
	A6R68_15908	WH1 domain-containing protein. (91 aa)
	A6R68_12862	CRIB domain-containing protein. (171 aa)
	A6R68_12452	FH2 domain-containing protein. (93 aa)
	A6R68_12640	Uncharacterized protein. (1284 aa)
	A6R68_00301	CRIB domain-containing protein. (355 aa)
	A6R68_00261	Uncharacterized protein. (244 aa)
	A6R68_00096	Uncharacterized protein. (214 aa)
	A6R68_00705	Uncharacterized protein. (484 aa)
	A6R68_13900	Uncharacterized protein. (566 aa)
	A6R68_00095	GIT domain-containing protein. (449 aa)
	A6R68_01072	Uncharacterized protein. (1075 aa)
	A6R68_01447	PH domain-containing protein. (335 aa)
	A6R68_02037	CRIB domain-containing protein. (395 aa)
	A6R68_02718	Uncharacterized protein. (209 aa)
	A6R68_02959	SH3 domain-containing protein. (387 aa)
	A6R68_02597	Uncharacterized protein. (780 aa)
	A6R68_02458	Uncharacterized protein. (126 aa)
	A6R68_02465	Uncharacterized protein. (86 aa)
	A6R68_02960	F-BAR domain-containing protein. (216 aa)
	A6R68_03639	PX domain-containing protein. (77 aa)
	A6R68_03729	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (113 aa)
	A6R68_03287	Uncharacterized protein. (190 aa)
	A6R68_03501	Uncharacterized protein. (1421 aa)
	A6R68_04551	F-BAR domain-containing protein. (80 aa)
	A6R68_04071	Uncharacterized protein. (732 aa)
	A6R68_04351	Uncharacterized protein. (304 aa)
	A6R68_04248	PHB domain-containing protein. (271 aa)
	A6R68_04550	Uncharacterized protein. (892 aa)
	A6R68_22267	C2 domain-containing protein. (128 aa)
	A6R68_22251	VWFA domain-containing protein. (281 aa)
	A6R68_23207	Uncharacterized protein. (316 aa)
	A6R68_23206	GFO_IDH_MocA domain-containing protein. (93 aa)
	A6R68_23708	Uncharacterized protein. (336 aa)
	A6R68_20250	CRIB domain-containing protein. (225 aa)
	A6R68_20623	Uncharacterized protein. (207 aa)
	A6R68_20724	ANK_REP_REGION domain-containing protein. (379 aa)
	A6R68_21730	DEP domain-containing protein. (105 aa)

Your Current Organism:

Neotoma lepida

NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A6R68_00095	A6R68_00096	A0A1A6GYJ7	A0A1A6GZI7	GIT domain-containing protein.	Uncharacterized protein.	0.744
A6R68_00095	A6R68_02458	A0A1A6GYJ7	A0A1A6GS40	GIT domain-containing protein.	Uncharacterized protein.	0.680
A6R68_00095	A6R68_02465	A0A1A6GYJ7	A0A1A6GRR2	GIT domain-containing protein.	Uncharacterized protein.	0.680
A6R68_00095	A6R68_02597	A0A1A6GYJ7	A0A1A6GSI1	GIT domain-containing protein.	Uncharacterized protein.	0.976
A6R68_00095	A6R68_03287	A0A1A6GYJ7	A0A1A6GPP8	GIT domain-containing protein.	Uncharacterized protein.	0.639
A6R68_00095	A6R68_03501	A0A1A6GYJ7	A0A1A6GNU0	GIT domain-containing protein.	Uncharacterized protein.	0.402
A6R68_00095	A6R68_03639	A0A1A6GYJ7	A0A1A6GQ51	GIT domain-containing protein.	PX domain-containing protein.	0.402
A6R68_00095	A6R68_04071	A0A1A6GYJ7	A0A1A6GNE1	GIT domain-containing protein.	Uncharacterized protein.	0.888
A6R68_00095	A6R68_04550	A0A1A6GYJ7	A0A1A6GL25	GIT domain-containing protein.	Uncharacterized protein.	0.462
A6R68_00095	A6R68_04551	A0A1A6GYJ7	A0A1A6GNH2	GIT domain-containing protein.	F-BAR domain-containing protein.	0.462
A6R68_00095	A6R68_06471	A0A1A6GYJ7	A0A1A6GFF2	GIT domain-containing protein.	Uncharacterized protein.	0.531
A6R68_00095	A6R68_08177	A0A1A6GYJ7	A0A1A6G3D7	GIT domain-containing protein.	Uncharacterized protein.	0.531
A6R68_00095	A6R68_08178	A0A1A6GYJ7	A0A1A6G5V1	GIT domain-containing protein.	Calponin-homology (CH) domain-containing protein.	0.531
A6R68_00095	A6R68_08314	A0A1A6GYJ7	A0A1A6G5B7	GIT domain-containing protein.	Uncharacterized protein.	0.885
A6R68_00095	A6R68_11368	A0A1A6GYJ7	A0A1A6FVB7	GIT domain-containing protein.	Uncharacterized protein.	0.639
A6R68_00095	A6R68_11370	A0A1A6GYJ7	A0A1A6FWD5	GIT domain-containing protein.	Uncharacterized protein.	0.639
A6R68_00095	A6R68_11612	A0A1A6GYJ7	A0A1A6FTI7	GIT domain-containing protein.	Protein kinase domain-containing protein.	0.862
A6R68_00095	A6R68_12452	A0A1A6GYJ7	A0A1A6H3P3	GIT domain-containing protein.	FH2 domain-containing protein.	0.550
A6R68_00095	A6R68_12640	A0A1A6GYJ7	A0A1A6H389	GIT domain-containing protein.	Uncharacterized protein.	0.402
A6R68_00095	A6R68_12862	A0A1A6GYJ7	A0A1A6H4M6	GIT domain-containing protein.	CRIB domain-containing protein.	0.883