STRINGSTRING
RNAN_0083 RNAN_0083 RNAN_0084 RNAN_0084 RNAN_0182 RNAN_0182 RNAN_0192 RNAN_0192 RNAN_0211 RNAN_0211 RNAN_0281 RNAN_0281 RNAN_0305 RNAN_0305 RNAN_0389 RNAN_0389 pleD-2 pleD-2 RNAN_0860 RNAN_0860 RNAN_0861 RNAN_0861 RNAN_1137 RNAN_1137 RNAN_1220 RNAN_1220 RNAN_1272 RNAN_1272 RNAN_1303 RNAN_1303 RNAN_1957 RNAN_1957 RNAN_2125 RNAN_2125 RNAN_2313 RNAN_2313 RNAN_2337 RNAN_2337 arcB arcB RNAN_2469 RNAN_2469 RNAN_2962 RNAN_2962 RNAN_3019 RNAN_3019 RNAN_3101 RNAN_3101 barA barA RNAN_3149 RNAN_3149 RNAN_3291 RNAN_3291 aer aer gmr-2 gmr-2 RNAN_3652 RNAN_3652
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RNAN_0083Hypothetical protein. (899 aa)
RNAN_0084Hypothetical protein. (210 aa)
RNAN_0182Hypothetical protein. (722 aa)
RNAN_0192Hypothetical protein. (612 aa)
RNAN_0211Diguanylate cyclase/phosphodiesterase. (511 aa)
RNAN_0281Hypothetical protein. (879 aa)
RNAN_0305Two-component hybrid sensor and regulator. (661 aa)
RNAN_0389Hypothetical protein. (375 aa)
pleD-2Two-component system, cell cycle response regulator. (424 aa)
RNAN_0860Response regulator receiver modulated diguanylate cyclase. (542 aa)
RNAN_0861PAS fold family. (530 aa)
RNAN_1137Sensor protein. (1143 aa)
RNAN_1220PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase. (847 aa)
RNAN_1272Hypothetical protein. (695 aa)
RNAN_1303Hypothetical protein. (538 aa)
RNAN_1957Hypothetical protein. (332 aa)
RNAN_2125Hypothetical protein. (638 aa)
RNAN_2313Sensory box/GGDEF family protein. (816 aa)
RNAN_2337Hypothetical protein. (212 aa)
arcBTwo-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB. (762 aa)
RNAN_2469Two-component system, unclassified family, sensor histidine kinase and response regulator. (1186 aa)
RNAN_2962Hypothetical protein. (1183 aa)
RNAN_3019PAS/PAC sensor-containing diguanylate cyclase. (460 aa)
RNAN_3101Signaling protein (EAL,CBS,GGDEF domains); EAL,CBS,GGDEF domains. (596 aa)
barATwo-component system, NarL family, sensor histidine kinase BarA. (896 aa)
RNAN_3149Hypothetical protein. (747 aa)
RNAN_3291Hypothetical protein. (920 aa)
aerAerotaxis receptor. (517 aa)
gmr-2Cyclic di-GMP phosphodiesterase Gmr. (1500 aa)
RNAN_3652Intracellular signaling protein. (868 aa)
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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