STRINGSTRING
zapD zapD coaE coaE tapD tapD tapC tapC tapB tapB RNAN_0040 RNAN_0040 pilA pilA pilM pilM pilN pilN pilO pilO pilP pilP pilQ pilQ RNAN_0200 RNAN_0200 RNAN_0831 RNAN_0831 RNAN_0832 RNAN_0832 RNAN_0833 RNAN_0833 RNAN_0834 RNAN_0834 pilY1 pilY1 RNAN_0836 RNAN_0836 RNAN_0837 RNAN_0837 RNAN_0838 RNAN_0838 RNAN_0839 RNAN_0839 RNAN_0840 RNAN_0840 pilE pilE RNAN_0842 RNAN_0842 RNAN_1070 RNAN_1070 pilT pilT pilT-2 pilT-2 RNAN_1073 RNAN_1073 yggT yggT RNAN_1076 RNAN_1076 yggW yggW pmbA pmbA tldD tldD RNAN_1279 RNAN_1279 RNAN_1280 RNAN_1280 maf maf mreD mreD mreC mreC mreB mreB RNAN_1287 RNAN_1287 RNAN_1288 RNAN_1288 RNAN_1289 RNAN_1289 RNAN_1290 RNAN_1290 RNAN_1291 RNAN_1291 RNAN_1292 RNAN_1292 pilC pilC epsE epsE RNAN_1295 RNAN_1295 exeA exeA RNAN_1297 RNAN_1297 RNAN_1298 RNAN_1298 RNAN_1299 RNAN_1299 RNAN_1300 RNAN_1300 RNAN_1301 RNAN_1301 RNAN_1302 RNAN_1302 RNAN_1582 RNAN_1582 RNAN_1968 RNAN_1968 RNAN_1969 RNAN_1969 RNAN_2103 RNAN_2103 RNAN_2104 RNAN_2104 RNAN_2105 RNAN_2105 RNAN_2579 RNAN_2579 exeN exeN exeM exeM exeL exeL exeK exeK epsJ epsJ gspI gspI xcpU xcpU outG outG exeF exeF epsE-2 epsE-2 epsD-2 epsD-2 exeC exeC hslR hslR hslO hslO RNAN_3341 RNAN_3341
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
zapDUPF0289 protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. (248 aa)
coaEdephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (195 aa)
tapDType 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (292 aa)
tapCType IV pilus assembly protein tapC. (410 aa)
tapBType IV pilus assembly protein tapB. (565 aa)
RNAN_0040Hypothetical protein. (42 aa)
pilAFimbrial protein. (143 aa)
pilMType IV pilus assembly protein PilM. (359 aa)
pilNType IV pilus assembly protein PilN. (197 aa)
pilOType IV pilus assembly protein PilO. (199 aa)
pilPType IV pilus assembly protein PilP. (178 aa)
pilQType IV pilus assembly protein PilQ. (688 aa)
RNAN_0200Hypothetical protein. (172 aa)
RNAN_0831Pre-pilin like leader sequence. (181 aa)
RNAN_0832Pre-pilin leader sequence. (144 aa)
RNAN_0833Hypothetical protein. (328 aa)
RNAN_0834Hypothetical protein. (166 aa)
pilY1Type IV pilus assembly protein PilY1. (1107 aa)
RNAN_0836Type IV pilin. (137 aa)
RNAN_0837Hypothetical protein. (163 aa)
RNAN_0838Hypothetical protein. (316 aa)
RNAN_0839Hypothetical protein. (125 aa)
RNAN_0840Hypothetical protein. (358 aa)
pilEFimbrial protein P9-2. (135 aa)
RNAN_0842Type IV pilus biogenesis protein, putative. (168 aa)
RNAN_1070Hypothetical protein. (145 aa)
pilTTwitching mobility protein. (374 aa)
pilT-2Twitching motility protein PilT. (350 aa)
RNAN_1073UPF0001 protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (223 aa)
yggTYggT family protein. (179 aa)
RNAN_1076Hypothetical protein. (140 aa)
yggWOxygen-independent coproporphyrinogen-III oxidase-like protein yggW; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (380 aa)
pmbAPmbA protein. (448 aa)
tldDTldD protein. (480 aa)
RNAN_1279UPF0012 hydrolase. (281 aa)
RNAN_1280Hypothetical protein. (1291 aa)
mafSeptum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (191 aa)
mreDRod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. (160 aa)
mreCRod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (289 aa)
mreBRod shape-determining protein MreB and related proteins. (347 aa)
RNAN_1287Type II secretory pathway component. (136 aa)
RNAN_1288Tfp-like pilus assembly protein. (253 aa)
RNAN_1289Pilin protein. (182 aa)
RNAN_1290MSHA pilin protein MshC. (148 aa)
RNAN_1291Type II secretory pathway, pseudopilin. (170 aa)
RNAN_1292Hypothetical protein. (176 aa)
pilCType IV pilus assembly protein PilC. (409 aa)
epsEGeneral secretion pathway protein E. (574 aa)
RNAN_1295Hypothetical protein. (359 aa)
exeAGeneral secretion pathway protein A. (301 aa)
RNAN_1297MSHA biogenesis protein MshL. (553 aa)
RNAN_1298Hypothetical protein. (107 aa)
RNAN_1299Hypothetical protein. (216 aa)
RNAN_1300Hypothetical protein. (198 aa)
RNAN_1301Hypothetical protein. (303 aa)
RNAN_13021-aminocyclopropane-1-carboxylate deaminase. (317 aa)
RNAN_1582Hypothetical protein. (794 aa)
RNAN_1968Hypothetical protein. (309 aa)
RNAN_1969Hypothetical protein. (261 aa)
RNAN_2103Transglutaminase domain-containing protein. (649 aa)
RNAN_2104Hypothetical protein. (320 aa)
RNAN_2105MoxR protein. (302 aa)
RNAN_2579Hypothetical protein. (369 aa)
exeNGeneral secretion pathway protein N. (247 aa)
exeMGeneral secretion pathway protein M; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (156 aa)
exeLGeneral secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (395 aa)
exeKGeneral secretion pathway protein K. (331 aa)
epsJGeneral secretion pathway protein J. (207 aa)
gspIGeneral secretion pathway protein I. (122 aa)
xcpUGeneral secretion pathway protein H. (197 aa)
outGGeneral secretion pathway protein G. (150 aa)
exeFGeneral secretion pathway protein F. (407 aa)
epsE-2General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (502 aa)
epsD-2General secretion pathway protein D. (706 aa)
exeCGeneral secretion pathway protein C. (317 aa)
hslRRibosome-associated heat shock protein Hsp15; Belongs to the HSP15 family. (159 aa)
hslOMolecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. (282 aa)
RNAN_3341Rhomboid family protein. (195 aa)
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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