STRINGSTRING
RNAN_0200 RNAN_0200 pmbA pmbA tldD tldD RNAN_1279 RNAN_1279 RNAN_1280 RNAN_1280 maf maf mreD mreD mreC mreC mreB mreB RNAN_1287 RNAN_1287 RNAN_1288 RNAN_1288 RNAN_1289 RNAN_1289 RNAN_1290 RNAN_1290 RNAN_1291 RNAN_1291 RNAN_1292 RNAN_1292 pilC pilC epsE epsE RNAN_1295 RNAN_1295 exeA exeA RNAN_1297 RNAN_1297 RNAN_1298 RNAN_1298 RNAN_1299 RNAN_1299 RNAN_1300 RNAN_1300 RNAN_1301 RNAN_1301 RNAN_1302 RNAN_1302 RNAN_1582 RNAN_1582 RNAN_1968 RNAN_1968 RNAN_1969 RNAN_1969 exeN exeN exeM exeM exeL exeL exeK exeK epsJ epsJ gspI gspI xcpU xcpU outG outG exeF exeF epsE-2 epsE-2 epsD-2 epsD-2 exeC exeC hslR hslR hslO hslO RNAN_3341 RNAN_3341
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RNAN_0200Hypothetical protein. (172 aa)
pmbAPmbA protein. (448 aa)
tldDTldD protein. (480 aa)
RNAN_1279UPF0012 hydrolase. (281 aa)
RNAN_1280Hypothetical protein. (1291 aa)
mafSeptum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (191 aa)
mreDRod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. (160 aa)
mreCRod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (289 aa)
mreBRod shape-determining protein MreB and related proteins. (347 aa)
RNAN_1287Type II secretory pathway component. (136 aa)
RNAN_1288Tfp-like pilus assembly protein. (253 aa)
RNAN_1289Pilin protein. (182 aa)
RNAN_1290MSHA pilin protein MshC. (148 aa)
RNAN_1291Type II secretory pathway, pseudopilin. (170 aa)
RNAN_1292Hypothetical protein. (176 aa)
pilCType IV pilus assembly protein PilC. (409 aa)
epsEGeneral secretion pathway protein E. (574 aa)
RNAN_1295Hypothetical protein. (359 aa)
exeAGeneral secretion pathway protein A. (301 aa)
RNAN_1297MSHA biogenesis protein MshL. (553 aa)
RNAN_1298Hypothetical protein. (107 aa)
RNAN_1299Hypothetical protein. (216 aa)
RNAN_1300Hypothetical protein. (198 aa)
RNAN_1301Hypothetical protein. (303 aa)
RNAN_13021-aminocyclopropane-1-carboxylate deaminase. (317 aa)
RNAN_1582Hypothetical protein. (794 aa)
RNAN_1968Hypothetical protein. (309 aa)
RNAN_1969Hypothetical protein. (261 aa)
exeNGeneral secretion pathway protein N. (247 aa)
exeMGeneral secretion pathway protein M; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (156 aa)
exeLGeneral secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (395 aa)
exeKGeneral secretion pathway protein K. (331 aa)
epsJGeneral secretion pathway protein J. (207 aa)
gspIGeneral secretion pathway protein I. (122 aa)
xcpUGeneral secretion pathway protein H. (197 aa)
outGGeneral secretion pathway protein G. (150 aa)
exeFGeneral secretion pathway protein F. (407 aa)
epsE-2General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (502 aa)
epsD-2General secretion pathway protein D. (706 aa)
exeCGeneral secretion pathway protein C. (317 aa)
hslRRibosome-associated heat shock protein Hsp15; Belongs to the HSP15 family. (159 aa)
hslOMolecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. (282 aa)
RNAN_3341Rhomboid family protein. (195 aa)
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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