STRINGSTRING
RNAN_0831 RNAN_0831 RNAN_0842 RNAN_0842 epsE epsE RNAN_1299 RNAN_1299 exeM exeM exeK exeK epsJ epsJ gspI gspI xcpU xcpU epsE-2 epsE-2 outG outG exeC exeC RNAN_3163 RNAN_3163 tapB tapB pilO pilO RNAN_0638 RNAN_0638
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RNAN_0831Pre-pilin like leader sequence. (181 aa)
RNAN_0842Type IV pilus biogenesis protein, putative. (168 aa)
epsEGeneral secretion pathway protein E. (574 aa)
RNAN_1299Hypothetical protein. (216 aa)
exeMGeneral secretion pathway protein M; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (156 aa)
exeKGeneral secretion pathway protein K. (331 aa)
epsJGeneral secretion pathway protein J. (207 aa)
gspIGeneral secretion pathway protein I. (122 aa)
xcpUGeneral secretion pathway protein H. (197 aa)
epsE-2General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (502 aa)
outGGeneral secretion pathway protein G. (150 aa)
exeCGeneral secretion pathway protein C. (317 aa)
RNAN_3163Late competence protein; DNA binding and uptake. (104 aa)
tapBType IV pilus assembly protein tapB. (565 aa)
pilOType IV pilus assembly protein PilO. (199 aa)
RNAN_0638Hypothetical protein. (310 aa)
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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