STRINGSTRING
RNAN_0305 RNAN_0305 RNAN_0389 RNAN_0389 RNAN_0661 RNAN_0661 RNAN_0861 RNAN_0861 RNAN_0963 RNAN_0963 RNAN_1957 RNAN_1957 RNAN_2313 RNAN_2313 arcB arcB RNAN_2561 RNAN_2561 RNAN_2840 RNAN_2840 RNAN_3149 RNAN_3149 gmr-2 gmr-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RNAN_0305Two-component hybrid sensor and regulator. (661 aa)
RNAN_0389Hypothetical protein. (375 aa)
RNAN_0661Hypothetical protein. (953 aa)
RNAN_0861PAS fold family. (530 aa)
RNAN_0963Hypothetical protein. (564 aa)
RNAN_1957Hypothetical protein. (332 aa)
RNAN_2313Sensory box/GGDEF family protein. (816 aa)
arcBTwo-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB. (762 aa)
RNAN_2561Multi-sensor signal transduction histidine kinase. (619 aa)
RNAN_2840Conserved hypothetical protein. (838 aa)
RNAN_3149Hypothetical protein. (747 aa)
gmr-2Cyclic di-GMP phosphodiesterase Gmr. (1500 aa)
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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