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Saut_0048 Saut_0048 Saut_0359 Saut_0359 Saut_0534 Saut_0534 Saut_0685 Saut_0685 Saut_0826 Saut_0826 pyrD pyrD Saut_1056 Saut_1056 Saut_1256 Saut_1256 Saut_1257 Saut_1257 Saut_1550 Saut_1550 Saut_1704 Saut_1704 dapB dapB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Saut_0048COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041:IPR001450:IPR017900:IPR004489; KEGG: tdn:Suden_0038 succinate dehydrogenase/fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin; SPTR: A3IXM6 Succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (235 aa)
Saut_0359Conserved hypothetical protein; COGs: COG1981 membrane protein; InterPro IPR005265:IPR014351; KEGG: tdn:Suden_0391 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q9ZJD5 UPF0093 membrane protein jhp_1377; PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: conserved hypothetical integral membrane protein. (140 aa)
Saut_0534Enoyl-(acyl-carrier-protein) reductase (NADH); COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002347; KEGG: tdn:Suden_1751 enoyl-(acyl carrier protein) reductase; SPTR: O24990 Enoyl-[acyl-carrier-protein] reductase [NADH]; PFAM: short chain dehydrogenase. (273 aa)
Saut_0685COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099:IPR001732; KEGG: tdn:Suden_0659 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase; SPTR: A2TZW0 Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase. (276 aa)
Saut_0826COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: tdn:Suden_1977 siroheme synthase CysG; PRIAM: Sirohydrochlorin ferrochelatase; SPTR: A3XKM2 Uroporphyrin-III C-methyltransferase-like; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain. (188 aa)
pyrDDihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (352 aa)
Saut_1056TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (317 aa)
Saut_1256COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR013027:IPR004112:IPR006076:IPR003953:IPR 003952:IPR014006; KEGG: tdn:Suden_1030 succinate dehydrogenase/fumarate reductase subunit A; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: A3IN99 Succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarat [...] (570 aa)
Saut_1257COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR017907:IPR006058:IPR001041:IPR017900:IPR 004489; KEGG: tdn:Suden_1029 succinate dehydrogenase/fumarate reductase subunit B; PRIAM: Succinate dehydrogenase; SPTR: A0ZA48 Succinate dehydrogenase; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (326 aa)
Saut_1550COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR010723:IPR007197:IPR006638:IPR004558; KEGG: tdn:Suden_0606 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q9ZLH0 Oxygen-independent coproporphyrinogen-III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyri [...] (456 aa)
Saut_1704Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (351 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (255 aa)
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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