STRINGSTRING
GCA_002067135_03301 GCA_002067135_03301 GCA_002067135_01531 GCA_002067135_01531 GCA_002067135_00582 GCA_002067135_00582 GCA_002067135_00581 GCA_002067135_00581 GCA_002067135_01970 GCA_002067135_01970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_002067135_03301Unannotated protein. (104 aa)
GCA_002067135_01531Unannotated protein. (322 aa)
GCA_002067135_00582Unannotated protein. (1289 aa)
GCA_002067135_00581Unannotated protein. (1455 aa)
GCA_002067135_01970Unannotated protein. (86 aa)
Your Current Organism:
Spirosoma rigui
NCBI taxonomy Id: 564064
Other names: KCTC 12531, NBRC 101117, S. rigui, Spirosoma rigui Baik et al. 2007, strain WPCB118
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