13 items (Micromonas pusilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1MYY7_MICPC	Predicted protein. (197 aa)
	C1MYY6_MICPC	Predicted protein. (647 aa)
	C1MQ12_MICPC	Predicted protein. (318 aa)
	C1MP84_MICPC	Predicted protein. (292 aa)
	C1MML1_MICPC	Predicted protein. (151 aa)
	C1N7J5_MICPC	Predicted protein; Belongs to the DEAD box helicase family. (577 aa)
	C1N4Z8_MICPC	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (441 aa)
	C1N4M8_MICPC	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (479 aa)
	C1N3V9_MICPC	Predicted protein. (512 aa)
	RPL35	60S ribosomal protein L35. (123 aa)
	C1ML26_MICPC	Predicted protein. (635 aa)
	C1ML12_MICPC	Predicted protein. (238 aa)
	C1MKP7_MICPC	Predicted protein. (673 aa)

Your Current Organism:

Micromonas pusilla

NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1MKP7_MICPC	C1ML12_MICPC	C1MKP7	C1ML12	Predicted protein.	Predicted protein.	0.995
C1MKP7_MICPC	C1ML26_MICPC	C1MKP7	C1ML26	Predicted protein.	Predicted protein.	0.683
C1MKP7_MICPC	C1MML1_MICPC	C1MKP7	C1MML1	Predicted protein.	Predicted protein.	0.987
C1MKP7_MICPC	C1MP84_MICPC	C1MKP7	C1MP84	Predicted protein.	Predicted protein.	0.996
C1MKP7_MICPC	C1MYY6_MICPC	C1MKP7	C1MYY6	Predicted protein.	Predicted protein.	0.938
C1MKP7_MICPC	C1MYY7_MICPC	C1MKP7	C1MYY7	Predicted protein.	Predicted protein.	0.938
C1MKP7_MICPC	C1N4M8_MICPC	C1MKP7	C1N4M8	Predicted protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.999
C1MKP7_MICPC	C1N4Z8_MICPC	C1MKP7	C1N4Z8	Predicted protein.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.999
C1MKP7_MICPC	C1N7J5_MICPC	C1MKP7	C1N7J5	Predicted protein.	Predicted protein; Belongs to the DEAD box helicase family.	0.947
C1MKP7_MICPC	RPL35	C1MKP7	C1MLJ7	Predicted protein.	60S ribosomal protein L35.	0.806
C1ML12_MICPC	C1MKP7_MICPC	C1ML12	C1MKP7	Predicted protein.	Predicted protein.	0.995
C1ML12_MICPC	C1MML1_MICPC	C1ML12	C1MML1	Predicted protein.	Predicted protein.	0.990
C1ML12_MICPC	C1MP84_MICPC	C1ML12	C1MP84	Predicted protein.	Predicted protein.	0.966
C1ML12_MICPC	C1MYY6_MICPC	C1ML12	C1MYY6	Predicted protein.	Predicted protein.	0.846
C1ML12_MICPC	C1MYY7_MICPC	C1ML12	C1MYY7	Predicted protein.	Predicted protein.	0.846
C1ML12_MICPC	C1N4M8_MICPC	C1ML12	C1N4M8	Predicted protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.986
C1ML12_MICPC	C1N4Z8_MICPC	C1ML12	C1N4Z8	Predicted protein.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.980
C1ML12_MICPC	C1N7J5_MICPC	C1ML12	C1N7J5	Predicted protein.	Predicted protein; Belongs to the DEAD box helicase family.	0.843
C1ML12_MICPC	RPL35	C1ML12	C1MLJ7	Predicted protein.	60S ribosomal protein L35.	0.990
C1ML26_MICPC	C1MKP7_MICPC	C1ML26	C1MKP7	Predicted protein.	Predicted protein.	0.683