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C1N880_MICPC C1N880_MICPC C1MJ75_MICPC C1MJ75_MICPC C1MKP7_MICPC C1MKP7_MICPC EIF6 EIF6 C1MM91_MICPC C1MM91_MICPC C1MVY1_MICPC C1MVY1_MICPC C1MYK7_MICPC C1MYK7_MICPC C1MZF0_MICPC C1MZF0_MICPC C1N4M8_MICPC C1N4M8_MICPC C1N4Z8_MICPC C1N4Z8_MICPC C1N7U3_MICPC C1N7U3_MICPC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C1N880_MICPCProtein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (684 aa)
C1MJ75_MICPCProbable ribosome biogenesis protein MICPUCDRAFT_50839; Probable pre-rRNA processing protein involved in ribosome biogenesis. (367 aa)
C1MKP7_MICPCPredicted protein. (673 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
C1MM91_MICPC60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (185 aa)
C1MVY1_MICPCH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (85 aa)
C1MYK7_MICPCRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (361 aa)
C1MZF0_MICPCNucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (679 aa)
C1N4M8_MICPCPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (479 aa)
C1N4Z8_MICPCRibosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (441 aa)
C1N7U3_MICPCRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (291 aa)
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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