STRINGSTRING
GACE_0124 GACE_0124 GACE_0262 GACE_0262 GACE_0422 GACE_0422 GACE_0933 GACE_0933 GACE_0946 GACE_0946 GACE_1870 GACE_1870 GACE_1871 GACE_1871 sucC sucC sucD sucD GACE_2122 GACE_2122 GACE_2123 GACE_2123 GACE_2124 GACE_2124 GACE_2125 GACE_2125
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GACE_0124Citrate synthase. (375 aa)
GACE_0262Malate dehydrogenase; Belongs to the LDH/MDH superfamily. (295 aa)
GACE_0422NADP-dependent malic enzyme. (431 aa)
GACE_0933Isocitrate dehydrogenase (NADP-dependent). (412 aa)
GACE_0946Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (412 aa)
GACE_1870Fumarate hydratase, subunit alpha. (273 aa)
GACE_1871Fumarate hydratase, subunit beta. (196 aa)
sucCSuccinyl-CoA ligase [ADP-forming] beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (383 aa)
sucDSuccinyl-CoA ligase [ADP-forming] alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
GACE_2122Succinate dehydrogenase, subunit A. (568 aa)
GACE_2123Succinate dehydrogenase, subunit B. (238 aa)
GACE_2124Succinate dehydrogenase, subunit C. (125 aa)
GACE_2125Succinate dehydrogenase, subunit D. (116 aa)
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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