STRINGSTRING
hemL hemL GACE_1702 GACE_1702 mfnA mfnA hisC-2 hisC-2 GACE_1496 GACE_1496 GACE_1453 GACE_1453 GACE_1417 GACE_1417 trpB-2 trpB-2 GACE_1272 GACE_1272 GACE_1099 GACE_1099 GACE_1087 GACE_1087 GACE_1080 GACE_1080 GACE_0967 GACE_0967 GACE_0966 GACE_0966 GACE_0916 GACE_0916 GACE_0763 GACE_0763 GACE_0752 GACE_0752 GACE_0747 GACE_0747 GACE_0695 GACE_0695 GACE_0686 GACE_0686 GACE_0445 GACE_0445 GACE_0353 GACE_0353 GACE_0308 GACE_0308 hisC hisC GACE_0141 GACE_0141 lysA lysA GACE_0125 GACE_0125 GACE_2180 GACE_2180 GACE_2172 GACE_2172 GACE_2171 GACE_2171 GACE_2155 GACE_2155 GACE_2028 GACE_2028 GACE_2001 GACE_2001 glyA glyA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hemLGlutamate-1-semialdehyde aminotransferase. (422 aa)
GACE_1702Ribonucleotide-diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (756 aa)
mfnAL-tyrosine decarboxylase; Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily. (372 aa)
hisC-2Histidinol-phosphate aminotransferase. (348 aa)
GACE_1496Aspartate aminotransferase. (381 aa)
GACE_1453Aspartate aminotransferase. (377 aa)
GACE_1417Pyruvate ferredoxin oxidoreductase, beta subunit. (291 aa)
trpB-2Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (426 aa)
GACE_1272Acetolactate synthase large subunit; Belongs to the TPP enzyme family. (555 aa)
GACE_1099Threonine synthase. (404 aa)
GACE_1087Cysteine desulfurase. (382 aa)
GACE_1080Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (381 aa)
GACE_0967Sulfopyruvate decarboxylase - beta subunit. (361 aa)
GACE_0966Cysteate synthase. (394 aa)
GACE_0916Radical SAM domain protein. (458 aa)
GACE_0763Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (622 aa)
GACE_0752methylmalonyl-CoA mutase, subunit alpha, C-terminus. (138 aa)
GACE_0747methylmalonyl-CoA mutase, subunit alpha, N-terminus. (548 aa)
GACE_0695Pyruvate ferredoxin oxidoreductase, beta subunit. (281 aa)
GACE_06862-oxoacid ferredoxin oxidoreductase, subunit beta. (269 aa)
GACE_0445Acetolactate synthase large subunit. (555 aa)
GACE_0353Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (385 aa)
GACE_0308L-threonine 3-O-phosphate decarboxylase. (332 aa)
hisCHistidinol-phosphate aminotransferase. (338 aa)
GACE_0141Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (623 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (419 aa)
GACE_0125Aspartate aminotransferase. (384 aa)
GACE_2180Decarboxylase. (452 aa)
GACE_2172Methylmalonyl-CoA mutase, N-terminal domain/subunit. (565 aa)
GACE_2171Methylmalonyl-CoA mutase, C-terminal domain/subunit. (141 aa)
GACE_21552-ketoisovalerate ferredoxin oxidoreductase, beta subunit. (275 aa)
GACE_2028Threonine dehydratase. (408 aa)
GACE_2001Aspartate aminotransferase. (369 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydromethanopterin (H4MPT) serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro- aldol mechanism; Belongs to the SHMT family. (421 aa)
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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